Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 52 gene–annotation pairs matching PF05546 across 148 genomes · 32 ms.

Species with hits:Nematostella vectensis 3Acropora austera 2Echinopora horrida 2Stephanocoenia intersepta 2Rhodactis osculifera 2Porites rus 2Porites lobata 2Porites evermanni 2Montipora cactus 1Montipora capitata 1Montipora capricornis 1Montipora foliosa 1Madracis senaria 1Acropora acuminata 1Porites australiensis 1Porites compressa 1Madracis auretenra 1Porites divaricata 1Porites harrisoni 1Porites lutea 1Siderastrea radians 1Porites cylindrica 1Fimbriaphyllia ancora 1Leptoseris scabra 1Acropora millepora 1Acropora awi 1Acropora cytherea 1Acropora florida 1Acropora gemmifera 1Acropora hyacinthus 1Acropora intermedia 1Acropora microphthalma 1Acropora muricata 1Dendrophyllia cribrosa 1Astreopora myriophthalma 1Acropora nasuta 1Acropora palmata 1Acropora spathulata 1Cladopsammia gracilis 1Catalaphyllia jardinei 1Colpophyllia natans 1Duncanopsammia axifuga 1Siderastrea siderea 1
SpeciesGene IDPfam termMatchSourceBrowser
Acropora acuminataaacu_s0260.g4.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora austeraENSKKQP00000015194.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora austeraENSKKQP00000015191.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora awiaawi_s0012.g21.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora cythereaacyt_s0015.g233.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora floridaaflo_s0411.g14.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora gemmiferaagem_s0123.g53.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora hyacinthusahya_s0078.g36.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora intermediaaint_s0040.g17.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora microphthalmaamic_s0323.g11.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora milleporaXP_029181622.2PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora muricataamur_s0197.g35.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Astreopora myriophthalmaBRAKERYMEP00000024656.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora nasutaanas_s0031.g55.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora palmataXP_074628411.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Acropora spathulataENSEWQP00005037667.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Cladopsammia gracilisBRAKERTYJP00000002571.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Catalaphyllia jardineiENSAVKP00000017426.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Colpophyllia natansFUN_032707-T1PF05546She9 / Mdm33 familyInterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000016988.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Dendrophyllia cribrosaBRAKERRLHP00000045505.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Echinopora horridaENSJVNP00000012653.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Echinopora horridaENSJVNP00000012650.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Fimbriaphyllia ancoraeanc_s040.g0103.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Leptoseris scabraANN32438-RAPF05546She9 / Mdm33 familyInterproscanJBrowse
Madracis auretenraENSIHXP00000012252.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Montipora cactusBRAKERNUSP00000048574.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Montipora capitatag1971.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Montipora capricornisXP_068751490.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Montipora foliosaXP_068688272.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Madracis senariaENSVTRP00000014360.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Nematostella vectensisXP_001635950.2PF05546She9 / Mdm33 familyInterproscanJBrowse
Nematostella vectensisXP_032241423.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Nematostella vectensisXP_032241424.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites australiensispaus_s0698.g16.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites compressaPorites_compressa_HIv1___RNAseq.g31818.t1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites cylindricaENSZOFP00000009177.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites divaricataENSHHBP00000007377.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites evermanniCAH3190482.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites evermanniCAH3155275.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites harrisoniKAM7440630.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites lobataENSNQRP00000050182.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites lobataENSNQRP00000050178.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites luteaXP_073230415.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites rusENSGYQP00005013807.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Porites rusENSGYQP00005013798.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000010757.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000010754.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Stephanocoenia interseptaENSDDJP00000042335.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Stephanocoenia interseptaENSDDJP00000042336.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Siderastrea radiansENSTHXP00000021477.1PF05546She9 / Mdm33 familyInterproscanJBrowse
Siderastrea sidereaFUN_031691-T1PF05546She9 / Mdm33 familyInterproscanJBrowse

TOP