Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 83 gene–annotation pairs matching PF09848 across 148 genomes · 5337 ms.

Species with hits:CGRAC2 7 AIDSS 4 SRADI 3 ACYTH 3 AHYAC 3 PAUST 3 ASPAT 3 AXANT 3 PHARR 2 PEVER 2 PCRUS 2 DLINE 2 PCOMP 2 MCACT 2 AAWI 2 ECAVO 2 AACUM 2 TRUBR 2 DCRIB 2 AINTE 2 AECHI 2 AHEMP 2 ATENE 2 HCOER 1 TCOCC 1 ACERV 1 PXISH 1 PVERR 1 PSINE1 1 PRUS 1 PMIZI 1 PMEAN 1 PLUTE 1 PLOBA 1 AEQUI 1 ASELA 1 PDAMI 1 DPERT 1 EDIAP 1 PCLAV 1 ALORI 1 PACUT 1 MSENI 1 MMURI 1 MCOMP 1 ANASU 1 LPERT 1

Species	Gene ID	Pfam term	Match	Source	Browser
AACUM	aacu_s0501.g1.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AACUM	aacu_s0501.g4.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AAWI	aawi_s0002.g152.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AAWI	aawi_s0002.g154.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ACERV	KAK2550270.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ACYTH	acyt_s0005.g6.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ACYTH	acyt_s0005.g3.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ACYTH	acyt_s0005.g3.t2	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AECHI	aech_s0379.g1.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AECHI	aech_s0003.g508.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AEQUI	EGACTEQ4350036078-PA	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AHEMP	Ahemp_001445-T1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AHEMP	Ahemp_020466-T1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AHYAC	ahya_s0020.g63.t2	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AHYAC	ahya_s0020.g63.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AHYAC	ahya_s0020.g62.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AIDSS	alvinactis_v1_g11689	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AIDSS	alvinactis_v1_g11690	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AIDSS	alvinactis_v1_g11691	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AIDSS	alvinactis_v1_g11672	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AINTE	aint_s0001.g46.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AINTE	aint_s0988.g3.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ALORI	alor_g23510.t2	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ANASU	anas_s0006.g190.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ASELA	asel_s0135.g29.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ASPAT	ENSEWQP00005015584.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ASPAT	ENSEWQP00005015579.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ASPAT	ENSEWQP00005015595.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ATENE	XP_031569320.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ATENE	XP_031569321.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AXANT	ENSOJPP00000028393.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AXANT	ENSOJPP00000028399.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
AXANT	ENSOJPP00000029070.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000040976.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000041000.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000058766.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000052214.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000046476.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000040998.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000010144.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
DCRIB	BRAKERRLHP00000013394.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
DCRIB	g31737.t1.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
DLINE	ENSDLIP00000007483.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
DLINE	ENSDLIP00000012695.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
DPERT	KAJ7352727.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ECAVO	ENSLDHP00000027486.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
ECAVO	ENSLDHP00000027478.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
EDIAP	KXJ23395.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
HCOER	ENSBQFP00000020822.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
LPERT	OS493_034335-T1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
MCACT	BRAKERNUSP00000006688.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
MCACT	g48817.t1.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
MCOMP	ENSODKP00000004679.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
MMURI	BRAKERXEIP00000035017.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
MSENI	ENSDTNP00000035757.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PACUT	Pocillopora_acuta_HIv2___RNAseq.g19306.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PAUST	paus_s0099.g12.t3	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PAUST	paus_s1308.g4.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PAUST	paus_s0375.g8.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PCLAV	CAB4012005.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PCOMP	Porites_compressa_HIv1___TS.g30225.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PCOMP	Porites_compressa_HIv1___RNAseq.g38275.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PCRUS	PcrG014658.mRNA1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PCRUS	PcrG021182.mRNA1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PDAMI	RMX58230.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PEVER	CAH3026361.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PEVER	CAH3151455.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PHARR	KAM7432001.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PHARR	KAM7432003.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PLOBA	ENSNQRP00000014019.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PLUTE	XP_073240254.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PMEAN	CAH3038213.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PMIZI	c0169.g038.t1.p1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PRUS	ENSGYQP00005027266.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PSINE1	g18164.t1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PVERR	XP_058972529.2	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
PXISH	HK74SY85_g26015	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
SRADI	ENSTHXP00000059840.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
SRADI	ENSTHXP00000060365.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
SRADI	ENSTHXP00000059837.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
TCOCC	TcoG005483.mRNA1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
TRUBR	BRAKERIOWP00000019777.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse
TRUBR	g16562.t1.1	PF09848	Schlafen group 3, DNA/RNA helicase domain	Interproscan	JBrowse