Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 38 gene–annotation pairs matching PF17657 across 148 genomes · 5971 ms.

Species with hits:HOLIG 9 AAURI2 4 CXAMA 4 HVIRI 4 MGRIS 4 CCRUX 2 DCRIB 2 HECHI 2 HSYMB 2 TRUBR 2 MSENA 1 MVIRU 1 PUMBR 1

Species	Gene ID	Pfam term	Match	Source	Browser
AAURI2	scaffold10.g113.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
AAURI2	scaffold4231.g1.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
AAURI2	scaffold10.g46.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
AAURI2	scaffold10.g46.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
CCRUX	g1138.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
CCRUX	g46.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
CXAMA	Cxam_g7178.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
CXAMA	Cxam_g25431.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
CXAMA	Cxam_g533.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
CXAMA	Cxam_g316.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
DCRIB	g9229.t1.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
DCRIB	BRAKERRLHP00000046965.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HECHI	ENSDJXP00000045072.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HECHI	ENSDJXP00000054393.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00002.G19706	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00001.G49590	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00014.G10510	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00014.G10510	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00353.G42961	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00522.G16709	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00150.G2156	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00002.G17796	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HOLIG	HOLI00001.G54005	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HSYMB	HSymV2.0_g02.02048_t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HSYMB	HSymV2.0_g02.02421_t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HVIRI	BRAKERKREP00000023057.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HVIRI	g20611.t1.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HVIRI	BRAKERKREP00000022737.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
HVIRI	g20302.t1.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
MGRIS	ANN28707-RA	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
MGRIS	ANN27658-RA	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
MGRIS	ANN28247-RA	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
MGRIS	ANN35755-RA	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
MSENA	ENSVTRP00000022480.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
MVIRU	scaffold121.g329.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
PUMBR	c2234.g006.t1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
TRUBR	g10875.t1.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse
TRUBR	BRAKERIOWP00000004364.1	PF17657	Bacterial DNA polymerase III alpha subunit finger domain	Interproscan	JBrowse