Gene Family

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🧬 OG0006839

This orthogroup contains 210 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.

no term is shared by every member — best support 75.7%

Consensus functional annotation

Support counts the member genes carrying the term. % of genes is that count over all 210 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.

Source Term Name / description Support % of genes % annotated Consistency
PANTHERPTHR46569E3 UBIQUITIN-PROTEIN LIGASE TRAIP159 / 21075.7%99.4%
of 160
≥50% support
PfamPF13639zf-RING_2 — Ring finger domain108 / 21051.4%95.6%
of 113
≥50% support
GOGO:0005634
Cellular Component
nucleus160 / 21076.2%100.0%
of 160
≥50% support
GOGO:0016567
Biological Process
protein ubiquitination159 / 21075.7%99.4%
of 160
≥50% support
GOGO:0031297
Biological Process
replication fork processing159 / 21075.7%99.4%
of 160
≥50% support
GOGO:0061630
Molecular Function
ubiquitin protein ligase activity159 / 21075.7%99.4%
of 160
≥50% support
GOGO:0090734
Cellular Component
site of DNA damage159 / 21075.7%99.4%
of 160
≥50% support
📊 Total members in OG0006839: 210
Show: genes per page

Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.

Species Gene ID Top NCBI-NR hit
(accession)
Top NCBI-NR hit description
(source organism)
Top UniProt hit
(Swiss-Prot)
Genome browser
Acropora acuminataaacu_s0462.g2.t1XP_015747112.1PREDICTED: E3 ubiquitin-protein ligase TRAIP-like [Acropora digitifera]JBrowse
Aurelia auritascaffold42.g48.t1noneJBrowse
Aurelia aurita complex sp. Pacificscaffold148.g25.t1noneJBrowse
Aurelia aurita complex sp. Pacificscaffold148.g26.t1noneJBrowse
Acropora austeraENSKKQP00000008844.1XP_015747112.1PREDICTED: E3 ubiquitin-protein ligase TRAIP-like [Acropora digitifera]JBrowse
Acropora austeraENSKKQP00000008855.1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora austeraENSKKQP00000008862.1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora austeraENSKKQP00000011703.1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora awiaawi_s0005.g48.t1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora cervicornisKAK2552967.1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Aurelia coeruleaevm.model.ptg000006l.91XP_020916910.1E3 ubiquitin-protein ligase TRAIP [Exaiptasia diaphana]JBrowse
Acropora cythereaacyt_s0020.g104.t1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora cythereaacyt_s0020.g104.t2XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora cythereaacyt_s0020.g105.t1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora digitiferachr12Alt.g26209.t1noneJBrowse
Acropora digitiferachr12Alt.g26211.t1noneJBrowse
Acropora echinataaech_s0007.g103.t1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Actinia equinaEGACTEQ4350038384-PAXP_031551986.1E3 ubiquitin-protein ligase TRAIP-like [Actinia tenebrosa]JBrowse
Acropora floridaaflo_s0023.g46.t1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
Acropora gemmiferaagem_s0049.g51.t1XP_029207541.1E3 ubiquitin-protein ligase TRAIP-like [Acropora millepora]JBrowse
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