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This orthogroup contains 206 genes from 126 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 206 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13381 | RNA POLYMERASE II HOLOENZYME COMPONENT SRB7 | 178 / 206 | 86.4% | 99.4% of 179 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 187 / 206 | 90.8% | 100.0% of 187 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 178 / 206 | 86.4% | 95.2% of 187 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 178 / 206 | 86.4% | 95.2% of 187 | ≥80% support |
| Pfam | PF11221 | Med21 — Subunit 21 of Mediator complex | 160 / 206 | 77.7% | 99.4% of 161 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita complex sp. Pacific | scaffold556.g8.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold556.g8.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000047372.1 | XP_015763735.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 21-like [Acropora digitifera] | Q16RX1 Mediator of RNA polymerase II transcription subunit 21 OS=Ae | JBrowse |
| Acropora austera | ENSKKQP00000047377.1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Acropora austera | ENSKKQP00000047385.1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Acropora awi | aawi_s0086.g19.t1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q2TBU8 Mediator of RNA polymerase II transcription subunit 21 OS=Bo | JBrowse |
| Acropora awi | aawi_s0086.g19.t2 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Acropora cervicornis | KAK2556284.1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Acropora cytherea | acyt_s0198.g11.t1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Acropora digitifera | chr9Alt.g20249.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0118.g9.t1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Actinia equina | EGACTEQ4350043935-PA | XP_031553226.1 | mediator of RNA polymerase II transcription subunit 21-like isoform X1 [Actinia tenebrosa] | Q16RX1 Mediator of RNA polymerase II transcription subunit 21 OS=Ae | JBrowse |
| Actinia equina | EGACTEQ4350053929-PA | XP_031553226.1 | mediator of RNA polymerase II transcription subunit 21-like isoform X1 [Actinia tenebrosa] | Q16RX1 Mediator of RNA polymerase II transcription subunit 21 OS=Ae | JBrowse |
| Acropora florida | aflo_s0377.g7.t1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q2TBU8 Mediator of RNA polymerase II transcription subunit 21 OS=Bo | JBrowse |
| Acropora florida | aflo_s0377.g8.t1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Acropora gemmifera | agem_s0271.g11.t1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q2TBU8 Mediator of RNA polymerase II transcription subunit 21 OS=Bo | JBrowse |
| Acropora hemprichii | Ahemp_014797-T1 | XP_015763735.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 21-like [Acropora digitifera] | Q16RX1 Mediator of RNA polymerase II transcription subunit 21 OS=Ae | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g7085 | XP_031553226.1 | mediator of RNA polymerase II transcription subunit 21-like isoform X1 [Actinia tenebrosa] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Acropora intermedia | aint_s0126.g17.t1 | XP_029205051.2 | mediator of RNA polymerase II transcription subunit 21-like [Acropora millepora] | Q7ZTI5 Mediator of RNA polymerase II transcription subunit 21 OS=Da | JBrowse |
| Actinoscyphia liui | gene07254.t1 | XP_031553226.1 | mediator of RNA polymerase II transcription subunit 21-like isoform X1 [Actinia tenebrosa] | Q16RX1 Mediator of RNA polymerase II transcription subunit 21 OS=Ae | JBrowse |
