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This orthogroup contains 205 genes from 135 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 205 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15574 | WD REPEAT DOMAIN-CONTAINING FAMILY | 182 / 205 | 88.8% | 100.0% of 182 | ≥80% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 171 / 205 | 83.4% | 99.4% of 172 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 182 / 205 | 88.8% | 100.0% of 182 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 182 / 205 | 88.8% | 100.0% of 182 | ≥80% support |
| GO | GO:0080008 Cellular Component | Cul4-RING E3 ubiquitin ligase complex | 182 / 205 | 88.8% | 100.0% of 182 | ≥80% support |
| GO | GO:0030374 Molecular Function | nuclear receptor coactivator activity | 181 / 205 | 88.3% | 99.5% of 182 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 181 / 205 | 88.3% | 99.5% of 182 | ≥80% support |
| KEGG | K11795 | DCAF6, IQWD1, NRIP, ARCAP — Ubiquitin system | 148 / 205 | 72.2% | 98.0% of 151 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0099.g10.t1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Alatina alata | Aala_g2172.t1 | CAB4027583.1 | UDP-glucose 4-epimerase [Paramuricea clavata] | Q9W0P5 UDP-glucose 4-epimerase OS=Drosophila melanogaster OX=7227 G | JBrowse |
| Aurelia aurita | scaffold5.g17.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold5.g17.t2 | none | – | JBrowse | |
| Aurelia aurita | scaffold5.g18.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000003312.1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora austera | ENSKKQP00000003331.1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora austera | ENSKKQP00000003345.1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora awi | aawi_s0093.g10.t1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora awi | aawi_s0093.g10.t2 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora cervicornis | KAK2570559.1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.333 | CAH3182435.1 | unnamed protein product [Porites lobata] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora cytherea | acyt_s0032.g66.t1 | XP_015769434.1 | PREDICTED: DDB1- and CUL4-associated factor 6-like [Acropora digitifera] | Q9DC22 DDB1- and CUL4-associated factor 6 OS=Mus musculus OX=10090 | JBrowse |
| Acropora digitifera | chr12Alt.g25162.t1 | none | – | JBrowse | |
| Acropora digitifera | chr12Alt.g25162.t2 | none | – | JBrowse | |
| Acropora echinata | aech_s0107.g11.t1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Actinia equina | EGACTEQ4350019705-PA | XP_031554372.1 | DDB1- and CUL4-associated factor 6-like [Actinia tenebrosa] | Q58WW2 DDB1- and CUL4-associated factor 6 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora florida | aflo_s0021.g6.t1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora gemmifera | agem_s0020.g103.t1 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
| Acropora hemprichii | Ahemp_001885-T2 | XP_029193535.2 | LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 6-like [Acropora millepora] | Q5R9B8 DDB1- and CUL4-associated factor 6 OS=Pongo abelii OX=9601 G | JBrowse |
