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This orthogroup contains 204 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 204 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR17408 | HISTONE RNA HAIRPIN-BINDING PROTEIN | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| Pfam | PF15247 | SLBP_RNA_bind — Histone RNA hairpin-binding protein RNA-binding domain | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| GO | GO:0006398 Biological Process | mRNA 3'-end processing by stem-loop binding and cleavage | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| GO | GO:0051028 Biological Process | mRNA transport | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| GO | GO:0071204 Cellular Component | histone pre-mRNA 3'end processing complex | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
| GO | GO:0071207 Molecular Function | histone pre-mRNA stem-loop binding | 181 / 204 | 88.7% | 100.0% of 181 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0005.g317.t1 | XP_029212927.2 | histone RNA hairpin-binding protein-like isoform X1 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora acuminata | aacu_s0005.g317.t2 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Aurelia aurita | scaffold70.g41.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000033792.1 | XP_029212927.2 | histone RNA hairpin-binding protein-like isoform X1 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora awi | aawi_s0052.g66.t1 | XP_029212927.2 | histone RNA hairpin-binding protein-like isoform X1 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora awi | aawi_s0052.g66.t2 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora cervicornis | KAK2573143.1 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Aurelia coerulea | evm.model.ptg000027l.265 | XP_027041722.1 | histone RNA hairpin-binding protein-like isoform X1 [Pocillopora damicornis] | Q9YGP6 Oocyte-specific histone RNA stem-loop-binding protein 2 OS=X | JBrowse |
| Acropora cytherea | acyt_s0173.g25.t1 | XP_029212927.2 | histone RNA hairpin-binding protein-like isoform X1 [Acropora millepora] | P79943 Histone RNA hairpin-binding protein OS=Xenopus laevis OX=835 | JBrowse |
| Acropora cytherea | acyt_s0173.g25.t2 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | P79943 Histone RNA hairpin-binding protein OS=Xenopus laevis OX=835 | JBrowse |
| Acropora digitifera | chr3Alt.g6631.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0092.g64.t1 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | – | JBrowse |
| Actinia equina | EGACTEQ4350006837-PA | XP_031571193.1 | histone RNA hairpin-binding protein-like isoform X1 [Actinia tenebrosa] | Q9VAN6 Histone RNA hairpin-binding protein OS=Drosophila melanogast | JBrowse |
| Actinia equina | EGACTEQ4350046475-PA | XP_031571193.1 | histone RNA hairpin-binding protein-like isoform X1 [Actinia tenebrosa] | Q9VAN6 Histone RNA hairpin-binding protein OS=Drosophila melanogast | JBrowse |
| Acropora florida | aflo_s0167.g9.t1 | XP_029212927.2 | histone RNA hairpin-binding protein-like isoform X1 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora florida | aflo_s0167.g9.t2 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora gemmifera | agem_s0001.g147.t1 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora gemmifera | agem_s0001.g147.t2 | XP_029212927.2 | histone RNA hairpin-binding protein-like isoform X1 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora hemprichii | Ahemp_008825-T1 | XP_029212928.2 | histone RNA hairpin-binding protein-like isoform X2 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora hyacinthus | ahya_s0002.g250.t1 | XP_029212927.2 | histone RNA hairpin-binding protein-like isoform X1 [Acropora millepora] | Q14493 Histone RNA hairpin-binding protein OS=Homo sapiens OX=9606 | JBrowse |
