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This orthogroup contains 190 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 190 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 165 / 190 | 86.8% | 100.0% of 165 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 174 / 190 | 91.6% | 100.0% of 174 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 165 / 190 | 86.8% | 94.8% of 174 | ≥80% support |
| KEGG | K12833 | SF3B14 — Spliceosome | 169 / 190 | 89.0% | 100.0% of 169 | ≥80% support |
| PANTHER | PTHR23003 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN | 140 / 190 | 73.7% | 87.5% of 160 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 141 / 190 | 74.2% | 81.0% of 174 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 140 / 190 | 73.7% | 80.5% of 174 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 140 / 190 | 73.7% | 80.5% of 174 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0055.g117.t1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Aurelia aurita | scaffold113.g41.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold113.g41.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000038167.1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora austera | ENSKKQP00000038179.1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora awi | aawi_s0058.g110.t1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora awi | aawi_s0058.g110.t2 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora awi | aawi_s1456.g1.t1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora awi | aawi_s1456.g1.t2 | XP_055846333.1 | splicing factor 3B subunit 6 [Episyrphus balteatus] | Q9VRV7 Splicing factor 3B subunit 6 OS=Drosophila melanogaster OX=7 | JBrowse |
| Acropora cervicornis | KAK2548442.1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Aurelia coerulea | evm.model.ptg000024l.30 | XP_002160322.1 | splicing factor 3B subunit 6 [Hydra vulgaris] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora digitifera | chr10Alt.g21018.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0083.g112.t1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Actinia equina | EGACTEQ4350053203-PA | XP_031552936.1 | splicing factor 3B subunit 6-like [Actinia tenebrosa] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Actinia equina | EGACTEQ4350053203-PB | XP_031552936.1 | splicing factor 3B subunit 6-like [Actinia tenebrosa] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora florida | aflo_s0066.g101.t1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora gemmifera | agem_s0024.g104.t1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora gemmifera | agem_s0024.g104.t2 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora hemprichii | Ahemp_008991-T1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora hyacinthus | ahya_s0029.g110.t1 | XP_015776255.1 | PREDICTED: splicing factor 3B subunit 6-like [Acropora digitifera] | Q9Y3B4 Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
