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This orthogroup contains 186 genes from 108 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 186 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13020 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 | 148 / 186 | 79.6% | 91.9% of 161 | ≥50% support |
| Pfam | PF00226 | DnaJ | 111 / 186 | 59.7% | 81.0% of 137 | ≥50% support |
| GO | GO:0000932 Cellular Component | P-body | 148 / 186 | 79.6% | 96.7% of 153 | ≥50% support |
| GO | GO:0005654 Cellular Component | nucleoplasm | 148 / 186 | 79.6% | 96.7% of 153 | ≥50% support |
| GO | GO:0035195 Biological Process | miRNA-mediated post-transcriptional gene silencing | 148 / 186 | 79.6% | 96.7% of 153 | ≥50% support |
| GO | GO:0060213 Biological Process | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 148 / 186 | 79.6% | 96.7% of 153 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 140 / 186 | 75.3% | 91.5% of 153 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 126 / 186 | 67.7% | 82.4% of 153 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 119 / 186 | 64.0% | 77.8% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0220.g2.t1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | – | JBrowse |
| Acropora austera | ENSKKQP00000018898.1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora awi | aawi_s0084.g38.t1 | XP_015752860.1 | PREDICTED: daf-12-interacting protein 1-like [Acropora digitifera] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora cervicornis | KAK2571624.1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora cytherea | acyt_s0292.g25.t1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora cytherea | acyt_s0292.g25.t2 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora digitifera | chr13Alt.g27423.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0023.g114.t1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora echinata | aech_s0023.g115.t1 | XP_015752860.1 | PREDICTED: daf-12-interacting protein 1-like [Acropora digitifera] | Q7N8Y3 Chaperone protein DnaJ OS=Photorhabdus laumondii subsp. laum | JBrowse |
| Acropora echinata | aech_s0023.g115.t2 | XP_015752860.1 | PREDICTED: daf-12-interacting protein 1-like [Acropora digitifera] | Q5GRK1 Chaperone protein DnaJ OS=Wolbachia sp. subsp. Brugia malayi | JBrowse |
| Actinia equina | EGACTEQ4350026816-PA | XP_031560146.1 | trinucleotide repeat-containing gene 6A protein-like [Actinia tenebrosa] | – | JBrowse |
| Acropora florida | aflo_s0208.g35.t1 | XP_015752860.1 | PREDICTED: daf-12-interacting protein 1-like [Acropora digitifera] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora florida | aflo_s0208.g35.t2 | XP_015752860.1 | PREDICTED: daf-12-interacting protein 1-like [Acropora digitifera] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora florida | aflo_s0208.g35.t3 | XP_015752860.1 | PREDICTED: daf-12-interacting protein 1-like [Acropora digitifera] | Q47XI7 Chaperone protein DnaJ OS=Colwellia psychrerythraea (strain | JBrowse |
| Acropora gemmifera | agem_s0175.g35.t1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora hemprichii | Ahemp_028645-T1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q7N8Y3 Chaperone protein DnaJ OS=Photorhabdus laumondii subsp. laum | JBrowse |
| Acropora hyacinthus | ahya_s0006.g236.t1 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Acropora hyacinthus | ahya_s0006.g236.t2 | XP_029189718.2 | trinucleotide repeat-containing gene 6B protein-like [Acropora millepora] | Q3UHK8 Trinucleotide repeat-containing gene 6A protein OS=Mus muscu | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g9191 | XP_020912390.2 | trinucleotide repeat-containing gene 6C protein-like [Exaiptasia diaphana] | – | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g9192 | XP_020912390.2 | trinucleotide repeat-containing gene 6C protein-like [Exaiptasia diaphana] | – | JBrowse |
