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This orthogroup contains 117 genes from 15 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 117 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45866 | DNA GYRASE/TOPOISOMERASE SUBUNIT B | 113 / 117 | 96.6% | 100.0% of 113 | ≥80% support |
| Pfam | PF02518 | HATPase_c — Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 97 / 117 | 82.9% | 85.8% of 113 | ≥80% support |
| GO | GO:0003918 Molecular Function | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | 110 / 117 | 94.0% | 100.0% of 110 | ≥80% support |
| GO | GO:0006265 Biological Process | DNA topological change | 110 / 117 | 94.0% | 100.0% of 110 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 109 / 117 | 93.2% | 99.1% of 110 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 109 / 117 | 93.2% | 99.1% of 110 | ≥80% support |
| Pfam | PF00204 | DNA_gyraseB — DNA gyrase B | 92 / 117 | 78.6% | 81.4% of 113 | ≥50% support |
| Pfam | PF01751 | Toprim | 92 / 117 | 78.6% | 81.4% of 113 | ≥50% support |
| Pfam | PF00986 | DNA_gyraseB_C — DNA gyrase B subunit, carboxyl terminus | 79 / 117 | 67.5% | 69.9% of 113 | ≥50% support |
| GO | GO:0005694 Cellular Component | chromosome | 68 / 117 | 58.1% | 61.8% of 110 | ≥50% support |
| KEGG | K02470 | gyrB — DNA repair and recombination proteins | 60 / 117 | 51.3% | 81.1% of 74 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita complex sp. Pacific | scaffold1660.g4.t1 | none | – | JBrowse | |
| Actinernus sp. WN-2022 | Acti_006475-T1 | none | – | JBrowse | |
| Calvadosia cruxmelitensis | g261.t1 | PCI30291.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [SAR324 cluster bacterium] | Q9I7C2 DNA gyrase subunit B OS=Pseudomonas aeruginosa (strain ATCC | JBrowse |
| Calvadosia cruxmelitensis | g289.t1 | AFI99120.1 | PDZ-domain protein inturned [Clytia hemisphaerica] | F6U5F9 Protein inturned OS=Xenopus tropicalis OX=8364 GN=intu PE=3 | JBrowse |
| Calvadosia cruxmelitensis | g51.t1 | MBP2143477.1 | UDP-N-acetylglucosamine 3-dehydrogenase [Methanococcus voltae] | B7JA34 UDP-N-acetylglucosamine 3-dehydrogenase OS=Acidithiobacillus | JBrowse |
| Chrysogorgia sp. JL179-B06 | Csp0G129070 | none | – | JBrowse | |
| Chrysogorgia sp. JL179-B06 | Csp0G407880 | none | – | JBrowse | |
| Cassiopea xamachana | Cxam_g13229.t1 | MBN2492615.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [Planctomycetota bacterium] | O84193 DNA gyrase subunit B OS=Chlamydia trachomatis serovar D (str | JBrowse |
| Cassiopea xamachana | Cxam_g2447.t1 | WP_170325407.1 | DNA topoisomerase IV subunit B [Ruegeria arenilitoris] | O54479 DNA topoisomerase 4 subunit B OS=Caulobacter vibrioides (str | JBrowse |
| Cassiopea xamachana | Cxam_g5487.t1 | WP_170327769.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [Ruegeria arenilitoris] | P0CAX1 DNA gyrase subunit B OS=Caulobacter vibrioides (strain ATCC | JBrowse |
| Exaiptasia diaphana | KXJ04610.1 | KXJ04610.1 | DNA gyrase subunit B, partial [Exaiptasia diaphana] | P22840 DNA gyrase subunit B (Fragment) OS=Proteus mirabilis OX=584 | JBrowse |
| Hydractinia echinata | ENSDJXP00000044955.1 | MCK5807081.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycoplasmataceae bacterium] | P05652 DNA gyrase subunit B OS=Bacillus subtilis (strain 168) OX=22 | JBrowse |
| Hydractinia echinata | ENSDJXP00000045389.1 | MCK5807081.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycoplasmataceae bacterium] | P43053 DNA gyrase subunit B OS=Metamycoplasma hominis (strain ATCC | JBrowse |
| Hydractinia echinata | ENSDJXP00000045398.1 | NQZ65617.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycoplasmatales bacterium] | P43053 DNA gyrase subunit B OS=Metamycoplasma hominis (strain ATCC | JBrowse |
| Hydractinia echinata | ENSDJXP00000053905.1 | WP_131599327.1 | DNA topoisomerase IV subunit B [Mycoplasma marinum] | Q2FYS5 DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (stra | JBrowse |
| Hydractinia echinata | ENSDJXP00000056156.1 | MCK5807081.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycoplasmataceae bacterium] | P05652 DNA gyrase subunit B OS=Bacillus subtilis (strain 168) OX=22 | JBrowse |
| Hemicorallium imperiale | evm.model.Contig123.268 | NQZ66269.1 | DNA topoisomerase IV subunit B [Mycoplasmatales bacterium] | H7C794 DNA topoisomerase 4 subunit B OS=Enterococcus faecalis (stra | JBrowse |
| Hemicorallium imperiale | evm.model.Contig130.33 | OED34369.1 | DNA gyrase subunit B [PVC group bacterium (ex Bugula neritina AB1)] | P13364 DNA gyrase subunit B OS=Pseudomonas putida OX=303 GN=gyrB PE | JBrowse |
| Hemicorallium imperiale | evm.model.Contig132.290 | TVQ17811.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B [Spirochaetaceae bacterium] | O87545 DNA gyrase subunit B OS=Treponema denticola (strain ATCC 354 | JBrowse |
| Hemicorallium imperiale | evm.model.Contig136.123 | MBQ8993710.1 | DNA topoisomerase IV subunit B [Turicibacter sp.] | Q9X3Y6 DNA gyrase subunit B OS=Bacillus anthracis OX=1392 GN=gyrB P | JBrowse |
