Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 83 gene–annotation pairs matching GO:0005587 across 148 genomes · 51 ms.

Species with hits:Porites lutea 4 Acropora acuminata 3 Porites cylindrica 3 Pteroeides griseum 3 Montipora efflorescens 3 Montipora capricornis 3 Cyphastrea salae 3 Paramuricea clavata 2 Acropora hyacinthus 2 Porites australiensis 2 Orbicella faveolata 2 Tubastraea coccinea 2 Acropora austera 2 Montipora foliosa 2 Acropora florida 2 Eunicella cavolini 2 Acropora tenuis 2 Acropora yongei 2 Acropora nasuta 2 Pachyseris speciosa 2 Porites harrisoni 1 Ricordea florida 1 Turritopsis rubra 1 Porites divaricata 1 Palythoa umbrosa 1 Paragorgia papillata 1 Podabacia crustacea 1 Siderastrea radians 1 Stylophora pistillata 1 Porites lobata 1 Platygyra sinensis 1 Pocillopora meandrina 1 Palythoa mizigama 1 Rhodactis osculifera 1 Micromussa lordhowensis 1 Porites compressa 1 Astrangia poculata 1 Acropora awi 1 Acropora cytherea 1 Acropora digitifera 1 Acropora echinata 1 Acropora gemmifera 1 Acropora intermedia 1 Acropora muricata 1 Anthopleura xanthogrammica 1 Pocillopora acuta 1 Cladopsammia gracilis 1 Chrysogorgia sp. JL179-B06 1 Cassiopea sp. PORT0000214 1 Hemicorallium imperiale 1 Montipora capitata 1 Montipora grisea 1 Meandrina meandrites 1 Oculina patagonica 1 Telmatactis stephensoni 1

Species	Gene ID	Gene Ontology term	Match	Source	Browser
Acropora acuminata	aacu_s0018.g76.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora acuminata	aacu_s0344.g34.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora acuminata	aacu_s0059.g56.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora austera	ENSKKQP00000045146.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora austera	ENSKKQP00000045124.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora awi	aawi_s0037.g79.t2	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora cytherea	acyt_s0024.g61.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora digitifera	g2108.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora echinata	aech_s0040.g18.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora florida	aflo_s0030.g71.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora florida	aflo_s0383.g6.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora gemmifera	agem_s0146.g2.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora hyacinthus	ahya_s0006.g82.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora hyacinthus	ahya_s0006.g82.t2	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora intermedia	aint_s0261.g22.t2	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora muricata	amur_s0307.g7.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora nasuta	anas_s0052.g87.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora nasuta	anas_s0263.g19.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Astrangia poculata	evm.model.Ap14.1849	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora tenuis	aten_s0184.g40.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora tenuis	aten_s0015.g121.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Anthopleura xanthogrammica	ENSOJPP00000034323.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora yongei	ayon_s0020.g15.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Acropora yongei	ayon_s0063.g106.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Cladopsammia gracilis	BRAKERTYJP00000005703.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Cyphastrea salae	ENSOFVP00000025714.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Cyphastrea salae	ENSOFVP00000022434.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Cyphastrea salae	ENSOFVP00000015807.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Chrysogorgia sp. JL179-B06	Csp0G142360	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Cassiopea sp. PORT0000214	P_ENSNWCP00000005011.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Eunicella cavolini	ENSLDHP00000045611.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Eunicella cavolini	ENSLDHP00000045622.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Hemicorallium imperiale	evm.model.Chr08.815	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora capitata	g4203.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora capricornis	XP_068729237.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora capricornis	XP_068729220.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora capricornis	XP_068729229.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora efflorescens	ENSTIFP00000010659.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora efflorescens	ENSTIFP00000010654.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora efflorescens	ENSTIFP00000010664.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora foliosa	XP_068695383.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora foliosa	XP_068695382.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Montipora grisea	ANN08178-RA	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Micromussa lordhowensis	ENSSYXP00000001253.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Meandrina meandrites	ENSVBPP00000038940.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Orbicella faveolata	XP_020600757.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Orbicella faveolata	XP_020632463.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Oculina patagonica	KAL9951772.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Pocillopora acuta	Pocillopora_acuta_HIv2___RNAseq.g14373.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites australiensis	paus_s0181.g39.t2	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites australiensis	paus_s0033.g27.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Paramuricea clavata	CAB4015854.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Paramuricea clavata	CAB4009025.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites compressa	Porites_compressa_HIv1___RNAseq.g24370.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Podabacia crustacea	PcrG000020.mRNA1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites cylindrica	ENSZOFP00000020102.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites cylindrica	ENSZOFP00000018347.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites cylindrica	ENSZOFP00000020120.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites divaricata	ENSHHBP00000023289.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Pteroeides griseum	ENSPYFP00000010559.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Pteroeides griseum	ENSPYFP00000010541.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Pteroeides griseum	ENSPYFP00000010550.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites harrisoni	KAM7442046.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites lobata	ENSNQRP00000033218.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites lutea	XP_073255729.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites lutea	XP_073232639.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites lutea	XP_073232638.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Porites lutea	XP_073243788.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Pocillopora meandrina	CAH3154686.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Palythoa mizigama	c1312.g009.t1.p1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Paragorgia papillata	Ppa0G200700	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Platygyra sinensis	evm.model.contig_91564.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Pachyseris speciosa	pspe_0.1.m1.7346.m1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Pachyseris speciosa	pspe_0.1.m1.7364.m1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Palythoa umbrosa	c0729.g006.t1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Ricordea florida	ENSORFP00005004668.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Rhodactis osculifera	ENSJQFP00000027956.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Stylophora pistillata	PFX32411.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Siderastrea radians	ENSTHXP00000050874.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Tubastraea coccinea	TcoG034566.mRNA1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Tubastraea coccinea	TcoG026058.mRNA1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Turritopsis rubra	BRAKERIOWP00000017886.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse
Telmatactis stephensoni	BRAKERFUXP00000041197.1	GO:0005587	collagen type IV trimer	Interproscan	JBrowse