Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 18 gene–annotation pairs matching PF11597 across 148 genomes · 34 ms.

Species with hits:Paramuricea clavata 2Hydra vulgaris 2Colpophyllia natans 1Fimbriaphyllia ancora 1Hydra oligactis 1Hydra viridissima 1Oculina arbuscula 1Oculina patagonica 1Pocillopora acuta 1Pocillopora damicornis 1Pocillopora meandrina 1Plumapathes pennacea 1Pocillopora verrucosa 1Scolanthus callimorphus 1Stylophora pistillata 1Turritopsis dohrnii 1
SpeciesGene IDPfam termMatchSourceBrowser
Colpophyllia natansFUN_005984-T1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Fimbriaphyllia ancoraeanc_s032.g0006.t1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Hydra oligactisHOLI00233.G58033PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000017438.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Hydra vulgarisXP_065664181.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Hydra vulgarisXP_065664180.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Oculina arbusculaENSPTBP00000010601.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Oculina patagonicaKAL9981807.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g17113.t1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Paramuricea clavataCAB4020229.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Paramuricea clavataCAB4020228.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Pocillopora damicornisRMX53799.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Pocillopora meandrinaCAH3110761.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Plumapathes pennaceaENSDKPP00000031936.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Pocillopora verrucosaXP_066018845.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.21591.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Stylophora pistillataPFX18764.1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse
Turritopsis dohrniiTur_r2.0_p0319.1.g4298.t1PF11597Mediator complex subunit 13 N-terminalInterproscanJBrowse

TOP