Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 37 gene–annotation pairs matching PF18043 across 148 genomes · 12 ms.

Species with hits:Hydractinia echinata 5 Clytia hemisphaerica 3 Sanderia malayensis 3 Alatina alata 2 Aurelia aurita complex sp. Pacific 2 Aurelia sp. 4 Dawson et al 2005 2 Bougainvillia cf. muscus 2 Cassiopea xamachana 2 Hydra oligactis 2 Nemopilema nomurai 1 Tripedalia maipoensis 1 Turritopsis dohrnii 1 Rhopilema esculentum 1 Pelagia noctiluca 1 Hydractinia symbiolongicarpus 1 Morbakka virulenta 1 Mastigias papua 1 Millepora dichotoma 1 Hydra vulgaris 1 Aurelia aurita 1 Cassiopea sp. PORT0000214 1 Catostylus mosaicus 1 Turritopsis rubra 1

Species	Gene ID	Pfam term	Match	Source	Browser
Alatina alata	Aala_g1340.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Alatina alata	Aala_g1339.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Aurelia aurita	scaffold279.g17.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold460.g6.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Aurelia aurita complex sp. Pacific	scaffold460.g6.t2	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Aurelia sp. 4 Dawson et al 2005	4_ENSDKXP00000025433.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Aurelia sp. 4 Dawson et al 2005	4_ENSDKXP00000025414.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Bougainvillia cf. muscus	M_g4024.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Bougainvillia cf. muscus	M_g4025.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Clytia hemisphaerica	XP_066910286.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Clytia hemisphaerica	XP_066910291.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Clytia hemisphaerica	XP_066910287.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Catostylus mosaicus	ENSSJYP00000010191.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Cassiopea sp. PORT0000214	P_ENSNWCP00000016934.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g10828.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g16640.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000051575.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000027337.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000051495.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000027342.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydractinia echinata	ENSDJXP00000027365.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00421.G26870	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G18456	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydractinia symbiolongicarpus	HSymV2.0_g09.17037_t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Hydra vulgaris	XP_065662255.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Millepora dichotoma	ENSYDOP00000010778.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Mastigias papua	BRAKERKYLP00000014049.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Morbakka virulenta	scaffold109.g45.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Nemopilema nomurai	BRAKERMNPP00000013327.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Pelagia noctiluca	ENSXLYP00000018045.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Rhopilema esculentum	XP_065054031.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000009360.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000013619.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Sanderia malayensis	ENSXQXP00000009368.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Turritopsis dohrnii	Tur_r2.0_p0002.1.g67507.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Tripedalia maipoensis	g5425.t1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse
Turritopsis rubra	BRAKERIOWP00000011521.1	PF18043	T4 RNA ligase 2 C-terminal	Interproscan	JBrowse