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This orthogroup contains 205 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 205 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10701 | SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| Pfam | PF01423 | LSM | 170 / 205 | 82.9% | 100.0% of 170 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0005682 Cellular Component | U5 snRNP | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0005685 Cellular Component | U1 snRNP | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0005686 Cellular Component | U2 snRNP | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0005687 Cellular Component | U4 snRNP | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0046540 Cellular Component | U4/U6 x U5 tri-snRNP complex | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0071004 Cellular Component | U2-type prespliceosome | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 175 / 205 | 85.4% | 100.0% of 175 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 170 / 205 | 82.9% | 97.1% of 175 | ≥80% support |
| KEGG | K11086 | SNRPB, SMB — DNA replication proteins | 156 / 205 | 76.1% | 97.5% of 160 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0082.g30.t1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Alatina alata | Aala_g1330.t1 | XP_046856029.1 | uncharacterized protein K02A2.6-like [Xenia sp. Carnegie-2017] | P04323 Retrovirus-related Pol polyprotein from transposon 17.6 OS=D | JBrowse |
| Aurelia aurita | scaffold110.g52.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold110.g54.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000024489.1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora awi | aawi_s0007.g74.t1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora cervicornis | KAK2556894.1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora cervicornis | KAK2556895.1 | XP_015773534.1 | PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Acropora digitifera] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora cytherea | acyt_s0112.g37.t1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora digitifera | chr4Alt.g8463.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0004.g24.t1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Actinia equina | EGACTEQ4350028259-PA | XP_031564089.1 | small nuclear ribonucleoprotein-associated protein B-like [Actinia tenebrosa] | P27048 Small nuclear ribonucleoprotein-associated protein B OS=Mus | JBrowse |
| Actinia equina | EGACTEQ4350041098-PA | XP_031566938.1 | uncharacterized protein LOC116301908 [Actinia tenebrosa] | P27048 Small nuclear ribonucleoprotein-associated protein B OS=Mus | JBrowse |
| Acropora florida | aflo_s0053.g31.t1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora florida | aflo_s0053.g31.t2 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora florida | aflo_s5806.g1.t1 | XP_015773534.1 | PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Acropora digitifera] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora gemmifera | agem_s0225.g28.t1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora gemmifera | agem_s0225.g28.t2 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora hemprichii | Ahemp_002192-T1 | XP_015773534.1 | PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Acropora digitifera] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
| Acropora hyacinthus | ahya_s0003.g172.t1 | XP_029204662.2 | small nuclear ribonucleoprotein-associated protein B'-like [Acropora millepora] | Q9PV94 Small nuclear ribonucleoprotein-associated protein B' OS=Gal | JBrowse |
