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This orthogroup contains 205 genes from 97 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 205 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | ubiquitin | 156 / 205 | 76.1% | 98.7% of 158 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 162 / 205 | 79.0% | 94.7% of 171 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 162 / 205 | 79.0% | 94.7% of 171 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 160 / 205 | 78.1% | 93.6% of 171 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0088.g32.t1 | XP_044178915.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X2 [Acropora millepora] | – | JBrowse |
| Acropora acuminata | aacu_s0488.g5.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora austera | ENSKKQP00000011011.1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora austera | ENSKKQP00000011015.1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora awi | aawi_s0063.g43.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora cervicornis | KAK2554182.1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P62972 Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355 PE=1 SV=2 | JBrowse |
| Acropora cytherea | acyt_s0201.g1.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora echinata | aech_s0068.g51.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P63048 Ubiquitin-ribosomal protein eL40 fusion protein OS=Bos tauru | JBrowse |
| Actinia equina | EGACTEQ4350019861-PA | XP_031557708.1 | E3 ubiquitin-protein ligase arih1-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350031734-PA | XP_031557708.1 | E3 ubiquitin-protein ligase arih1-like [Actinia tenebrosa] | – | JBrowse |
| Acropora florida | aflo_s0014.g72.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora gemmifera | agem_s0093.g51.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora hyacinthus | ahya_s0070.g42.t1 | XP_015761113.1 | PREDICTED: polyubiquitin 8-like [Acropora digitifera] | P33190 Ubiquitin-ribosomal protein eL40 fusion protein OS=Tetrahyme | JBrowse |
| Acropora hyacinthus | ahya_s0175.g1.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Acropora intermedia | aint_s0004.g106.t1 | XP_015761113.1 | PREDICTED: polyubiquitin 8-like [Acropora digitifera] | P33190 Ubiquitin-ribosomal protein eL40 fusion protein OS=Tetrahyme | JBrowse |
| Acropora intermedia | aint_s0016.g12.t1 | XP_044178915.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X2 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Actinoscyphia liui | gene12983.t1 | XP_031557708.1 | E3 ubiquitin-protein ligase arih1-like [Actinia tenebrosa] | P0C224 Ubiquitin-ribosomal protein eL40 fusion protein OS=Neurospor | JBrowse |
| Acropora loripes | alor_g8065.t1 | XP_044178914.1 | E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora] | P0C032 Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sati | JBrowse |
| Actinia mediterranea | ENSQPTP00000016977.1 | XP_031557708.1 | E3 ubiquitin-protein ligase arih1-like [Actinia tenebrosa] | P29504 Ubiquitin-ribosomal protein eS31 fusion protein OS=Manduca s | JBrowse |
| Actinia mediterranea | ENSQPTP00000053941.1 | XP_031557708.1 | E3 ubiquitin-protein ligase arih1-like [Actinia tenebrosa] | P29504 Ubiquitin-ribosomal protein eS31 fusion protein OS=Manduca s | JBrowse |
