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This orthogroup contains 204 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 204 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15528 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 175 / 204 | 85.8% | 100.0% of 175 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 177 / 204 | 86.8% | 100.0% of 177 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
| GO | GO:0008134 Molecular Function | transcription factor binding | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
| GO | GO:0030374 Molecular Function | nuclear receptor coactivator activity | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
| GO | GO:0051091 Biological Process | positive regulation of DNA-binding transcription factor activity | 175 / 204 | 85.8% | 98.9% of 177 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0048.g88.t1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Aurelia aurita | scaffold27.g116.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold513.g7.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000035265.1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Acropora awi | aawi_s0103.g19.t1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Acropora cervicornis | KAK2554926.1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Aurelia coerulea | evm.model.ptg000027l.80 | XP_002154989.2 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha [Hydra vulgaris] | Q8BUL6 Pleckstrin homology domain-containing family A member 1 OS=M | JBrowse |
| Acropora cytherea | acyt_s0110.g7.t1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Acropora digitifera | chr3Alt.g6014.t1 | none | – | JBrowse | |
| Acropora digitifera | chr3Alt.g6014.t2 | none | – | JBrowse | |
| Acropora echinata | aech_s0140.g43.t1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Actinia equina | EGACTEQ4350018667-PA | XP_031554276.1 | peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350018667-PB | XP_031554276.1 | peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350018667-PC | XP_031554276.1 | peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350053053-PA | XP_031554276.1 | peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like [Actinia tenebrosa] | – | JBrowse |
| Acropora gemmifera | agem_s0349.g7.t1 | XP_015777232.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X2 [Acropora digitifera] | – | JBrowse |
| Acropora hemprichii | Ahemp_015881-T1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Acropora hyacinthus | ahya_s0240.g32.t1 | XP_015777224.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g26068 | XP_020908265.1 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X2 [Exaiptasia diaphana] | – | JBrowse |
| Acropora intermedia | aint_s0057.g44.t1 | XP_015777232.1 | PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X2 [Acropora digitifera] | – | JBrowse |
