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Support counts the member genes carrying the term. % of genes is that count over all 200 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45841 | MRNA TURNOVER PROTEIN 4 MRTO4 | 178 / 200 | 89.0% | 100.0% of 178 | ≥80% support |
| Pfam | PF17777 | RL10P_insert — Insertion domain in 60S ribosomal protein L10P | 171 / 200 | 85.5% | 96.1% of 178 | ≥80% support |
| Pfam | PF00466 | Ribosomal_L10 — Ribosomal protein L10 | 165 / 200 | 82.5% | 92.7% of 178 | ≥80% support |
| GO | GO:0000956 Biological Process | nuclear-transcribed mRNA catabolic process | 178 / 200 | 89.0% | 100.0% of 178 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 178 / 200 | 89.0% | 100.0% of 178 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 178 / 200 | 89.0% | 100.0% of 178 | ≥80% support |
| GO | GO:0006364 Biological Process | rRNA processing | 178 / 200 | 89.0% | 100.0% of 178 | ≥80% support |
| GO | GO:0030687 Cellular Component | preribosome, large subunit precursor | 178 / 200 | 89.0% | 100.0% of 178 | ≥80% support |
| GO | GO:0042273 Biological Process | ribosomal large subunit biogenesis | 178 / 200 | 89.0% | 100.0% of 178 | ≥80% support |
| GO | GO:0000027 Biological Process | ribosomal large subunit assembly | 160 / 200 | 80.0% | 89.9% of 178 | ≥80% support |
| KEGG | K14815 | MRT4 — Ribosome biogenesis | 153 / 200 | 76.5% | 99.4% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0055.g88.t1 | XP_015757347.1 | PREDICTED: mRNA turnover protein 4 homolog isoform X1 [Acropora digitifera] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Aurelia aurita | scaffold113.g21.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold113.g21.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000040863.1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | A4FV84 mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRT | JBrowse |
| Acropora austera | ENSKKQP00000040869.1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | A4FV84 mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRT | JBrowse |
| Acropora austera | ENSKKQP00000040882.1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Acropora awi | aawi_s0058.g83.t1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Acropora awi | aawi_s0058.g83.t2 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | A4FV84 mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRT | JBrowse |
| Acropora cervicornis | KAK2551467.1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Aurelia coerulea | evm.model.ptg000024l.53 | XP_030830115.1 | mRNA turnover protein 4 homolog [Strongylocentrotus purpuratus] | A4FV84 mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRT | JBrowse |
| Acropora cytherea | acyt_s0097.g77.t1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Acropora digitifera | chr10Alt.g20990.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0083.g83.t1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Actinia equina | EGACTEQ4350026947-PA | XP_031552981.1 | mRNA turnover protein 4 homolog [Actinia tenebrosa] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Actinia equina | EGACTEQ4350026947-PB | XP_031552981.1 | mRNA turnover protein 4 homolog [Actinia tenebrosa] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Acropora florida | aflo_s0066.g73.t1 | XP_044181894.1 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Acropora gemmifera | agem_s0024.g132.t1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Acropora hemprichii | Ahemp_009011-T1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Acropora hyacinthus | ahya_s0029.g81.t1 | XP_029195683.2 | mRNA turnover protein 4 homolog [Acropora millepora] | Q9UKD2 mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=M | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g16366 | XP_031552981.1 | mRNA turnover protein 4 homolog [Actinia tenebrosa] | A4FV84 mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRT | JBrowse |
