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Support counts the member genes carrying the term. % of genes is that count over all 169 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15114 | REPLICATION PROTEIN A3 | 140 / 169 | 82.8% | 100.0% of 140 | ≥80% support |
| Pfam | PF08661 | Rep_fac-A_3 — Replication factor A protein 3 | 146 / 169 | 86.4% | 100.0% of 146 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 146 / 169 | 86.4% | 100.0% of 146 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 146 / 169 | 86.4% | 100.0% of 146 | ≥80% support |
| GO | GO:0006260 Biological Process | DNA replication | 146 / 169 | 86.4% | 100.0% of 146 | ≥80% support |
| GO | GO:0006281 Biological Process | DNA repair | 146 / 169 | 86.4% | 100.0% of 146 | ≥80% support |
| GO | GO:0006310 Biological Process | DNA recombination | 146 / 169 | 86.4% | 100.0% of 146 | ≥80% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| GO | GO:0003684 Molecular Function | damaged DNA binding | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| GO | GO:0003697 Molecular Function | single-stranded DNA binding | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| GO | GO:0005662 Cellular Component | DNA replication factor A complex | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| GO | GO:0006284 Biological Process | base-excision repair | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| GO | GO:0006289 Biological Process | nucleotide-excision repair | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| GO | GO:0006298 Biological Process | mismatch repair | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| GO | GO:0035861 Cellular Component | site of double-strand break | 140 / 169 | 82.8% | 95.9% of 146 | ≥80% support |
| KEGG | K10740 | RPA3 — DNA repair and recombination proteins | 119 / 169 | 70.4% | 99.2% of 120 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0293.g14.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Aurelia aurita complex sp. Pacific | scaffold214.g14.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000042046.1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | Q9CQ71 Replication protein A 14 kDa subunit OS=Mus musculus OX=1009 | JBrowse |
| Acropora austera | ENSKKQP00000042054.1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Acropora awi | aawi_s0155.g8.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Acropora cytherea | acyt_s0055.g13.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Acropora digitifera | chr8Alt.g18284.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0119.g39.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Actinia equina | EGACTEQ4350053250-PA | XP_031556473.1 | replication protein A 14 kDa subunit-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350053250-PB | XP_031556473.1 | replication protein A 14 kDa subunit-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350053250-PC | XP_031556473.1 | replication protein A 14 kDa subunit-like [Actinia tenebrosa] | Q9CQ71 Replication protein A 14 kDa subunit OS=Mus musculus OX=1009 | JBrowse |
| Acropora gemmifera | agem_s0265.g7.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Acropora hemprichii | Ahemp_002864-T1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Acropora hyacinthus | ahya_s0005.g100.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g379 | XP_031556473.1 | replication protein A 14 kDa subunit-like [Actinia tenebrosa] | Q9CQ71 Replication protein A 14 kDa subunit OS=Mus musculus OX=1009 | JBrowse |
| Acropora intermedia | aint_s0330.g10.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Acropora intermedia | aint_s0330.g10.t2 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | P35244 Replication protein A 14 kDa subunit OS=Homo sapiens OX=9606 | JBrowse |
| Actinoscyphia liui | gene11133.t1 | XP_031556473.1 | replication protein A 14 kDa subunit-like [Actinia tenebrosa] | – | JBrowse |
| Acropora loripes | alor_g16261.t1 | XP_029200693.2 | replication protein A 14 kDa subunit-like [Acropora millepora] | – | JBrowse |
| Actinia mediterranea | ENSQPTP00000000820.1 | XP_031556473.1 | replication protein A 14 kDa subunit-like [Actinia tenebrosa] | Q9CQ71 Replication protein A 14 kDa subunit OS=Mus musculus OX=1009 | JBrowse |
