← Back to the gene family browser
This orthogroup contains 160 genes from 109 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 160 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21245 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN | 131 / 160 | 81.9% | 98.5% of 133 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 131 / 160 | 81.9% | 98.5% of 133 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 132 / 160 | 82.5% | 98.5% of 134 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 132 / 160 | 82.5% | 98.5% of 134 | ≥80% support |
| KEGG | K24527 | RBM18 — Spliceosome | 123 / 160 | 76.9% | 99.2% of 124 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alatina alata | Aala_g2289.t1 | XP_042861281.1 | uncharacterized protein LOC122246652 [Penaeus japonicus] | Q9P298 HIG1 domain family member 1B OS=Homo sapiens OX=9606 GN=HIGD | JBrowse |
| Aurelia aurita | scaffold2.g173.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000026367.1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Acropora austera | ENSKKQP00000026374.1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Acropora cervicornis | KAK2553160.1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Actinia equina | EGACTEQ4350025628-PA | XP_031564256.1 | probable RNA-binding protein 18 [Actinia tenebrosa] | Q66J99 Probable RNA-binding protein 18 OS=Xenopus laevis OX=8355 GN | JBrowse |
| Actinia equina | EGACTEQ4350026011-PA | XP_031564256.1 | probable RNA-binding protein 18 [Actinia tenebrosa] | Q66J99 Probable RNA-binding protein 18 OS=Xenopus laevis OX=8355 GN | JBrowse |
| Acropora florida | aflo_s0078.g57.t1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q3ZCC5 Probable RNA-binding protein 18 OS=Bos taurus OX=9913 GN=RBM | JBrowse |
| Acropora hemprichii | Ahemp_002017-T1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g25811 | XP_020897862.1 | probable RNA-binding protein 18 [Exaiptasia diaphana] | Q66J99 Probable RNA-binding protein 18 OS=Xenopus laevis OX=8355 GN | JBrowse |
| Actinoscyphia liui | gene00997.t1 | XP_020897862.1 | probable RNA-binding protein 18 [Exaiptasia diaphana] | Q6PBM8 Probable RNA-binding protein 18 OS=Danio rerio OX=7955 GN=rb | JBrowse |
| Acropora loripes | alor_g6382.t1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Actinia mediterranea | ENSQPTP00000022079.1 | XP_031564256.1 | probable RNA-binding protein 18 [Actinia tenebrosa] | Q66J99 Probable RNA-binding protein 18 OS=Xenopus laevis OX=8355 GN | JBrowse |
| Actinia mediterranea | ENSQPTP00000058361.1 | XP_031564256.1 | probable RNA-binding protein 18 [Actinia tenebrosa] | Q66J99 Probable RNA-binding protein 18 OS=Xenopus laevis OX=8355 GN | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000028890.1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Astreopora myriophthalma | g31380.t1.1 | none | – | JBrowse | |
| Acropora palmata | XP_074618674.1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Astrangia poculata | evm.model.Ap4.5885 | KAJ7337043.1 | Putative RNA-binding protein 18 [Desmophyllum pertusum] | Q66J99 Probable RNA-binding protein 18 OS=Xenopus laevis OX=8355 GN | JBrowse |
| Acropora pulchra | FUN_035901-T1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q96H35 Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=R | JBrowse |
| Acropora selago | asel_s1789.g1.t1 | XP_015751735.1 | PREDICTED: probable RNA-binding protein 18 [Acropora digitifera] | Q3ZCC5 Probable RNA-binding protein 18 OS=Bos taurus OX=9913 GN=RBM | JBrowse |
