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Support counts the member genes carrying the term. % of genes is that count over all 154 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46205 | LOQUACIOUS, ISOFORM B | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
| Pfam | PF00035 | dsrm — Double-stranded RNA binding motif | 134 / 154 | 87.0% | 98.5% of 136 | ≥80% support |
| GO | GO:0003725 Molecular Function | double-stranded RNA binding | 136 / 154 | 88.3% | 100.0% of 136 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
| GO | GO:0016442 Cellular Component | RISC complex | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
| GO | GO:0030422 Biological Process | siRNA processing | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
| GO | GO:0035197 Molecular Function | siRNA binding | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
| GO | GO:0070578 Cellular Component | RISC-loading complex | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
| GO | GO:0070920 Biological Process | regulation of regulatory ncRNA processing | 135 / 154 | 87.7% | 99.3% of 136 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0037.g22.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | B0U3D8 Ribonuclease 3 OS=Xylella fastidiosa (strain M12) OX=405440 | JBrowse |
| Acropora austera | ENSKKQP00000012074.1 | XP_044178879.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X2 [Acropora millepora] | B0U3D8 Ribonuclease 3 OS=Xylella fastidiosa (strain M12) OX=405440 | JBrowse |
| Acropora austera | ENSKKQP00000012082.1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora awi | aawi_s0104.g18.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora cervicornis | KAK2561031.1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | B0U3D8 Ribonuclease 3 OS=Xylella fastidiosa (strain M12) OX=405440 | JBrowse |
| Acropora cytherea | acyt_s0026.g37.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora digitifera | chr14Alt.g29195.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0002.g586.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | Q7ZYA5 Interferon-inducible double-stranded RNA-dependent protein k | JBrowse |
| Actinia equina | EGACTEQ4350005714-PA | XP_031555508.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog [Actinia tenebrosa] | Q91836 Interferon-inducible double-stranded RNA-dependent protein k | JBrowse |
| Actinia equina | EGACTEQ4350005714-PB | XP_031555508.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog [Actinia tenebrosa] | Q91836 Interferon-inducible double-stranded RNA-dependent protein k | JBrowse |
| Actinia equina | EGACTEQ4350005714-PC | XP_031555508.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog [Actinia tenebrosa] | Q91836 Interferon-inducible double-stranded RNA-dependent protein k | JBrowse |
| Actinia equina | EGACTEQ4350015823-PA | XP_031555508.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350018417-PA | XP_031555508.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog [Actinia tenebrosa] | Q5BJ52 RISC-loading complex subunit tarbp2 OS=Xenopus tropicalis OX | JBrowse |
| Acropora florida | aflo_s0562.g10.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora gemmifera | agem_s1056.g2.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora hyacinthus | ahya_s0113.g131.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | Q91836 Interferon-inducible double-stranded RNA-dependent protein k | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g27760 | XP_020897568.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A [Exaiptasia diaphana] | – | JBrowse |
| Acropora intermedia | aint_s0571.g4.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | – | JBrowse |
| Actinoscyphia liui | gene27024.t1 | XP_020897568.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A [Exaiptasia diaphana] | – | JBrowse |
| Acropora loripes | alor_g300.t1 | XP_044178878.1 | interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X1 [Acropora millepora] | B0U3D8 Ribonuclease 3 OS=Xylella fastidiosa (strain M12) OX=405440 | JBrowse |
