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Support counts the member genes carrying the term. % of genes is that count over all 149 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 120 / 149 | 80.5% | 93.8% of 128 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 123 / 149 | 82.6% | 93.9% of 131 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 120 / 149 | 80.5% | 91.6% of 131 | ≥80% support |
| PANTHER | PTHR48034 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 81 / 149 | 54.4% | 68.1% of 119 | ≥50% support |
| Pfam | PF02213 | GYF | 111 / 149 | 74.5% | 86.7% of 128 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 113 / 149 | 75.8% | 86.3% of 131 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0015.g124.t1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Acropora austera | ENSKKQP00000023226.1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | – | JBrowse |
| Acropora austera | ENSKKQP00000023232.1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Acropora awi | aawi_s0014.g110.t1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | – | JBrowse |
| Acropora cervicornis | KAK2551007.1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Acropora cytherea | acyt_s0029.g86.t1 | XP_029188115.2 | splicing factor U2af large subunit A-like [Acropora millepora] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Acropora digitifera | chr4Alt.g8804.t1 | none | – | JBrowse | |
| Acropora digitifera | chr4Alt.g8804.t2 | none | – | JBrowse | |
| Acropora echinata | aech_s0004.g266.t1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Actinia equina | EGACTEQ4350008791-PA | XP_031549180.1 | uncharacterized protein LOC116286739 [Actinia tenebrosa] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Actinia equina | EGACTEQ4350022748-PA | XP_031549180.1 | uncharacterized protein LOC116286739 [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350028019-PA | XP_031549180.1 | uncharacterized protein LOC116286739 [Actinia tenebrosa] | – | JBrowse |
| Acropora florida | aflo_s0241.g15.t1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | – | JBrowse |
| Acropora gemmifera | agem_s0037.g132.t1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Acropora hemprichii | Ahemp_010324-T1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | – | JBrowse |
| Acropora hyacinthus | ahya_s0010.g31.t1 | XP_029188115.2 | splicing factor U2af large subunit A-like [Acropora millepora] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g24332 | XP_020894411.1 | uncharacterized protein LOC110233459 [Exaiptasia diaphana] | Q7ZWA3 RNA-binding motif protein, X chromosome OS=Danio rerio OX=79 | JBrowse |
| Acropora intermedia | aint_s0041.g33.t1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Actinoscyphia liui | gene01788.t1 | XP_020894411.1 | uncharacterized protein LOC110233459 [Exaiptasia diaphana] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Acropora loripes | alor_g1164.t1 | XP_015756394.1 | PREDICTED: splicing factor U2af large subunit A-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
