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Support counts the member genes carrying the term. % of genes is that count over all 144 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 134 / 144 | 93.1% | 100.0% of 134 | ≥80% support |
| PANTHER | PTHR47279 | TRANSCRIPTION FACTOR SOX-30 | 111 / 144 | 77.1% | 82.8% of 134 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 110 / 144 | 76.4% | 98.2% of 112 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 95 / 144 | 66.0% | 84.8% of 112 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 93 / 144 | 64.6% | 83.0% of 112 | ≥50% support |
| GO | GO:1990837 Molecular Function | sequence-specific double-stranded DNA binding | 93 / 144 | 64.6% | 83.0% of 112 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora loripes | alor_g10564.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Actinia mediterranea | ENSQPTP00000000736.1 | XP_031566986.1 | transcription factor Sox-8-like, partial [Actinia tenebrosa] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Actinia mediterranea | ENSQPTP00000040007.1 | XP_031566986.1 | transcription factor Sox-8-like, partial [Actinia tenebrosa] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora microphthalma | amic_s0034.g108.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora millepora | XP_029212055.1 | XP_029212055.1 | transcription factor Sox-17-beta.1-like [Acropora millepora] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora muricata | amur_s0117.g45.t1 | XP_029212055.1 | transcription factor Sox-17-beta.1-like [Acropora millepora] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000034523.1 | CAH3125611.1 | unnamed protein product [Porites lobata] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Astreopora myriophthalma | g28197.t1.1 | none | – | JBrowse | |
| Acropora nasuta | anas_s0168.g41.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora palmata | XP_074610675.1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Astrangia poculata | evm.model.Ap2.311 | XP_020614385.1 | transcription factor SOX-6-like [Orbicella faveolata] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora pulchra | FUN_023340-T1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora selago | asel_s0131.g21.t1 | XP_029212055.1 | transcription factor Sox-17-beta.1-like [Acropora millepora] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Actinernus sp. WN-2022 | Acti_009416-T1 | none | – | JBrowse | |
| Actinostola sp. cb2023 | Actinostola_07100 | none | – | JBrowse | |
| Acropora spathulata | ENSEWQP00005012438.1 | XP_029212055.1 | transcription factor Sox-17-beta.1-like [Acropora millepora] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Actinia tenebrosa | XP_031566986.1 | XP_031566986.1 | transcription factor Sox-8-like, partial [Actinia tenebrosa] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora tenuis | aten_s0011.g36.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000026636.1 | XP_031566986.1 | transcription factor Sox-8-like, partial [Actinia tenebrosa] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora yongei | ayon_s0042.g147.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
