← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 142 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 130 / 142 | 91.6% | 100.0% of 130 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 131 / 142 | 92.3% | 100.0% of 131 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 130 / 142 | 91.6% | 99.2% of 131 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 128 / 142 | 90.1% | 97.7% of 131 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 124 / 142 | 87.3% | 94.7% of 131 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 122 / 142 | 85.9% | 93.1% of 131 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 122 / 142 | 85.9% | 93.1% of 131 | ≥80% support |
| PANTHER | PTHR24328 | HOMEOBOX PROTEIN MOX | 110 / 142 | 77.5% | 85.3% of 129 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 110 / 142 | 77.5% | 84.0% of 131 | ≥50% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 110 / 142 | 77.5% | 84.0% of 131 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0253.g25.t1 | XP_029212994.1 | homeobox protein unc-4 homolog [Acropora millepora] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Acropora austera | ENSKKQP00000019420.1 | XP_015763395.1 | PREDICTED: paired mesoderm homeobox protein 2B-like isoform X1 [Acropora digitifera] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora awi | aawi_s0114.g31.t1 | XP_015763395.1 | PREDICTED: paired mesoderm homeobox protein 2B-like isoform X1 [Acropora digitifera] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora cervicornis | KAK2572012.1 | XP_015763395.1 | PREDICTED: paired mesoderm homeobox protein 2B-like isoform X1 [Acropora digitifera] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora cytherea | acyt_s0029.g164.t1 | XP_029212994.1 | homeobox protein unc-4 homolog [Acropora millepora] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Acropora digitifera | chr13Alt.g27755.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0007.g74.t1 | XP_029212994.1 | homeobox protein unc-4 homolog [Acropora millepora] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Actinia equina | EGACTEQ4350039889-PA | XP_031567114.1 | homeobox protein Hox-D8-like isoform X3 [Actinia tenebrosa] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora florida | aflo_s0133.g32.t1 | XP_015763395.1 | PREDICTED: paired mesoderm homeobox protein 2B-like isoform X1 [Acropora digitifera] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora gemmifera | agem_s0246.g7.t1 | XP_015763395.1 | PREDICTED: paired mesoderm homeobox protein 2B-like isoform X1 [Acropora digitifera] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora hemprichii | Ahemp_013446-T1 | XP_015763396.1 | PREDICTED: homeobox protein unc-4-like isoform X2 [Acropora digitifera] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora hyacinthus | ahya_s0017.g80.t1 | XP_029212994.1 | homeobox protein unc-4 homolog [Acropora millepora] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g9705 | XP_020908697.1 | retinal homeobox protein Rax [Exaiptasia diaphana] | Q9I9A2 Retinal homeobox protein Rx2 OS=Oryzias latipes OX=8090 GN=r | JBrowse |
| Acropora intermedia | aint_s0245.g37.t1 | XP_029212994.1 | homeobox protein unc-4 homolog [Acropora millepora] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora intermedia | aint_s2254.g2.t1 | XP_015763395.1 | PREDICTED: paired mesoderm homeobox protein 2B-like isoform X1 [Acropora digitifera] | – | JBrowse |
| Actinoscyphia liui | gene11049.t1 | XP_020908697.1 | retinal homeobox protein Rax [Exaiptasia diaphana] | O77215 Homeobox protein unc-4 OS=Drosophila melanogaster OX=7227 GN | JBrowse |
| Acropora loripes | alor_g21646.t1 | XP_029212994.1 | homeobox protein unc-4 homolog [Acropora millepora] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Actinia mediterranea | ENSQPTP00000013567.1 | XP_031567114.1 | homeobox protein Hox-D8-like isoform X3 [Actinia tenebrosa] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Actinia mediterranea | ENSQPTP00000013581.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000052612.1 | XP_031567114.1 | homeobox protein Hox-D8-like isoform X3 [Actinia tenebrosa] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
