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Support counts the member genes carrying the term. % of genes is that count over all 80 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 73 / 80 | 91.3% | 100.0% of 73 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 73 / 80 | 91.3% | 100.0% of 73 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 67 / 80 | 83.8% | 91.8% of 73 | ≥80% support |
| PANTHER | PTHR24340 | HOMEOBOX PROTEIN NKX | 59 / 80 | 73.8% | 93.7% of 63 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 62 / 80 | 77.5% | 84.9% of 73 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 61 / 80 | 76.3% | 83.6% of 73 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 59 / 80 | 73.8% | 80.8% of 73 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 59 / 80 | 73.8% | 80.8% of 73 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 44 / 80 | 55.0% | 60.3% of 73 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0025.g139.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora austera | ENSKKQP00000030971.1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora awi | aawi_s0033.g32.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora cervicornis | KAK2553910.1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | Q3LU41 Homeobox protein prophet of Pit-1 OS=Theropithecus gelada OX | JBrowse |
| Acropora cytherea | acyt_s0248.g24.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora digitifera | chr6Alt.g12480.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0114.g6.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora gemmifera | agem_s0313.g10.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora hemprichii | Ahemp_011748-T1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora hyacinthus | ahya_s0021.g70.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora intermedia | aint_s0112.g25.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora microphthalma | amic_s0199.g59.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora microphthalma | amic_s1305.g1.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora millepora | XP_029179400.2 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora muricata | amur_s0474.g9.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Astreopora myriophthalma | BRAKERYMEP00000031165.1 | KAJ7355143.1 | Transcription factor lbx1 [Desmophyllum pertusum] | Q26604 Homeobox protein SMOX-5 OS=Schistosoma mansoni OX=6183 GN=SM | JBrowse |
| Astreopora myriophthalma | g32862.t1.1 | none | – | JBrowse | |
| Acropora nasuta | anas_s0047.g105.t1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Acropora palmata | XP_074609746.1 | XP_029179400.2 | paired mesoderm homeobox protein 2-like [Acropora millepora] | E7FDX5 Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b P | JBrowse |
| Astrangia poculata | evm.model.Ap10.1262 | KAJ7355143.1 | Transcription factor lbx1 [Desmophyllum pertusum] | Q804R0 Transcription factor LBX2 OS=Danio rerio OX=7955 GN=lbx2 PE= | JBrowse |
