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Support counts the member genes carrying the term. % of genes is that count over all 69 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23431 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| Pfam | PF01194 | RNA_pol_N — RNA polymerases N / 8 kDa subunit | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001055 Molecular Function | RNA polymerase II activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001056 Molecular Function | RNA polymerase III activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006360 Biological Process | transcription by RNA polymerase I | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006366 Biological Process | transcription by RNA polymerase II | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0042797 Biological Process | tRNA transcription by RNA polymerase III | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| KEGG | K03007 | RPABC5, RPB10, POLR2L — DNA repair and recombination proteins | 59 / 69 | 85.5% | 100.0% of 59 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Orbicella franksi | XP_081329416.1 | PFX25841.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Stylophora pistillata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Oculina patagonica | KAL9965801.1 | PFX25841.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Stylophora pistillata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| OUT | Corticium_candelabrum+XP_062523909.1 | none | – | JBrowse | |
| OUT | Oscarella_lobularis+XP_065831121.1 | none | – | JBrowse | |
| OUT | Sycon_ciliatum+XP_065183332.1 | none | – | JBrowse | |
| Pocillopora acuta | Pocillopora_acuta_HIv2___RNAseq.g17501.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Porites australiensis | paus_s0160.g7.t1 | none | – | JBrowse | |
| Paramuricea clavata | CAB4034082.1 | CAB4034082.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Paramuricea clavata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Paramuricea clavata | CAB4034083.1 | CAB4034083.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Paramuricea clavata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Porites compressa | Porites_compressa_HIv1___RNAseq.g20064.t1 | none | – | JBrowse | |
| Podabacia crustacea | PcrG021881.mRNA1 | none | – | JBrowse | |
| Pocillopora damicornis | RMX60746.1 | none | – | JBrowse | |
| Porites evermanni | CAH3191238.1 | none | – | JBrowse | |
| Porites evermanni | CAH3197150.1 | none | – | JBrowse | |
| Porites harrisoni | KAM7442970.1 | none | – | JBrowse | |
| Pocillopora meandrina | CAH3146281.1 | none | – | JBrowse | |
| Palythoa mizigama | c1072.g002.t1.p1 | XP_014243422.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Cimex lectularius] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Paragorgia papillata | Ppa0G273170 | XP_044589001.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Cotesia glomerata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Plumapathes pennacea | ENSDKPP00000028487.1 | CAH3197150.1 | unnamed protein product [Porites evermanni] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Paracondylactis sinensis | g17597.t1 | none | – | JBrowse |
