Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 56 gene–annotation pairs matching PF09159 across 148 genomes · 10 ms.

Species with hits:Leptogorgia sarmentosa 3 Acropora selago 2 Acropora muricata 2 Acropora cytherea 2 Acropora echinata 2 Acropora awi 2 Acropora gemmifera 2 Eunicella verrucosa 2 Acropora hyacinthus 2 Acropora intermedia 2 Acropora nasuta 2 Muricea muricata 2 Acropora microphthalma 2 Diadumene lineata 1 Exaiptasia diaphana 1 Hemicorallium imperiale 1 Metridium senile 1 Hydra oligactis 1 Callogorgia gracilis 1 Morbakka virulenta 1 Paramuricea clavata 1 Paragorgia papillata 1 Palythoa umbrosa 1 Paraphelliactis xishaensis sp. nov. 1 Dendronephthya gigantea 1 Acropora austera 1 Condylactis gigantea 1 Acropora yongei 1 Acropora tenuis 1 Acropora spathulata 1 Acropora pulchra 1 Acropora palmata 1 Astreopora myriophthalma 1 Acropora millepora 1 Acropora loripes 1 Actinoscyphia liui 1 Alvinactis idsseensis sp. Nov. 1 Acropora hemprichii 1 Acropora florida 1 Acropora digitifera 1 Acropora cervicornis 1 Xenia sp. Carnegie-2017 1

Species	Gene ID	Pfam term	Match	Source	Browser
Acropora austera	ENSKKQP00000021393.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora awi	aawi_s0158.g29.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora awi	aawi_s0158.g29.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora cervicornis	KAK2557158.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora cytherea	acyt_s1025.g2.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora cytherea	acyt_s1025.g2.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora digitifera	g27038.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora echinata	aech_s0052.g51.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora echinata	aech_s0052.g51.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora florida	aflo_s1892.g1.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora gemmifera	agem_s0070.g107.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora gemmifera	agem_s0070.g107.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora hemprichii	Ahemp_028382-T1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora hyacinthus	ahya_s0169.g27.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora hyacinthus	ahya_s0169.g27.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Alvinactis idsseensis sp. Nov.	alvinactis_v1_g9015	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora intermedia	aint_s0101.g14.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora intermedia	aint_s0101.g14.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Actinoscyphia liui	gene10615.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora loripes	alor_g10015.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora microphthalma	amic_s0005.g145.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora microphthalma	amic_s0005.g145.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora millepora	XP_029193097.2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora muricata	amur_s0635.g6.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora muricata	amur_s0635.g6.t3	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Astreopora myriophthalma	BRAKERYMEP00000007835.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora nasuta	anas_s0009.g28.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora nasuta	anas_s0009.g28.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora palmata	XP_074639448.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora pulchra	FUN_037927-T1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora selago	asel_s0112.g29.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora selago	asel_s0112.g29.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora spathulata	ENSEWQP00005009958.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora tenuis	aten_s0133.g31.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Acropora yongei	ayon_s0015.g83.t2	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Condylactis gigantea	ENSKFPP00000010034.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Callogorgia gracilis	ENSFVQP00000008651.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Dendronephthya gigantea	XP_028395422.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Diadumene lineata	ENSDLIP00000025531.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Exaiptasia diaphana	KXJ29205.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Eunicella verrucosa	ENSNOVP00005016093.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Eunicella verrucosa	ENSNOVP00005016085.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Hemicorallium imperiale	evm.model.Chr11.281	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Hydra oligactis	HOLI00459.G54253	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Leptogorgia sarmentosa	ENSAPQP00000016315.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Leptogorgia sarmentosa	ENSAPQP00000016296.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Leptogorgia sarmentosa	ENSAPQP00000016300.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000054153.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000053946.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Metridium senile	ENSDTNP00000030546.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Morbakka virulenta	scaffold604.g1.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Paramuricea clavata	CAB3993817.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Paragorgia papillata	Ppa0G287530	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Palythoa umbrosa	c0696.g015.t1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Paraphelliactis xishaensis sp. nov.	HK74SY85_g9216	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse
Xenia sp. Carnegie-2017	XP_046856670.1	PF09159	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Interproscan	JBrowse