In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0031.g24.t1 | XP_016354148.1 | PREDICTED: SH3 domain-containing RING finger protein 3-like [Sinocyclocheilus anshuiensis] | Q6NRD3 E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis OX=8355 | JBrowse |
| Alatina alata | Aala_g407.t1 | VZI35390.1 | unnamed protein product [Spirometra erinaceieuropaei] | Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 OS=Ar | JBrowse |
| Acropora austera | ENSKKQP00000023144.1 | XP_046696601.1 | E3 ubiquitin-protein ligase SH3RF3-like [Silurus meridionalis] | Q6NRD3 E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis OX=8355 | JBrowse |
| Acropora austera | ENSKKQP00000023153.1 | XP_022326126.1 | E3 ubiquitin-protein ligase SH3RF1-like isoform X1 [Crassostrea virginica] | Q8C120 E3 ubiquitin-protein ligase SH3RF3 OS=Mus musculus OX=10090 | JBrowse |
| Acropora austera | ENSKKQP00000023160.1 | XP_016354148.1 | PREDICTED: SH3 domain-containing RING finger protein 3-like [Sinocyclocheilus anshuiensis] | Q8C120 E3 ubiquitin-protein ligase SH3RF3 OS=Mus musculus OX=10090 | JBrowse |
| Acropora awi | aawi_s0240.g10.t1 | XP_056127332.1 | E3 ubiquitin-protein ligase SH3RF3-like [Rhinichthys klamathensis goyatoka] | Q8TEJ3 E3 ubiquitin-protein ligase SH3RF3 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora cervicornis | KAK2568006.1 | XP_022326127.1 | SH3 domain-containing RING finger protein 3-like isoform X2 [Crassostrea virginica] | Q6NRD3 E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis OX=8355 | JBrowse |
| Aurelia coerulea | evm.model.ptg000003l.105 | XP_022326126.1 | E3 ubiquitin-protein ligase SH3RF1-like isoform X1 [Crassostrea virginica] | Q8BZT2 E3 ubiquitin-protein ligase SH3RF2 OS=Mus musculus OX=10090 | JBrowse |
| Acropora cytherea | acyt_s0027.g24.t1 | XP_009047099.1 | hypothetical protein LOTGIDRAFT_230513 [Lottia gigantea] | Q28E95 E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus tropicalis OX= | JBrowse |
| Acropora cytherea | acyt_s0027.g24.t2 | XP_016018444.2 | E3 ubiquitin-protein ligase SH3RF3 isoform X1 [Rousettus aegyptiacus] | Q6NRD3 E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis OX=8355 | JBrowse |
| Acropora digitifera | chr5Alt.g10656.t1 | AAI67346.1 | Unknown (protein for MGC:135632) [Xenopus tropicalis] | – | JBrowse |
| Acropora digitifera | chr5Alt.g10659.t1 | XP_053616335.1 | E3 ubiquitin-protein ligase SH3RF3 isoform X1 [Plodia interpunctella] | – | JBrowse |
| Acropora echinata | aech_s0020.g234.t1 | XP_033805246.1 | E3 ubiquitin-protein ligase SH3RF3 isoform X2 [Geotrypetes seraphini] | A5D8S5 E3 ubiquitin-protein ligase SH3RF1 OS=Danio rerio OX=7955 GN | JBrowse |
| Actinia equina | EGACTEQ4350017386-PA | XP_009047099.1 | hypothetical protein LOTGIDRAFT_230513 [Lottia gigantea] | Q8C120 E3 ubiquitin-protein ligase SH3RF3 OS=Mus musculus OX=10090 | JBrowse |
| Actinia equina | EGACTEQ4350017386-PB | KFO79332.1 | E3 ubiquitin-protein ligase SH3RF1, partial [Cuculus canorus] | Q8TEJ3 E3 ubiquitin-protein ligase SH3RF3 OS=Homo sapiens OX=9606 G | JBrowse |
| Actinia equina | EGACTEQ4350017386-PC | XP_023673303.1 | SH3 domain-containing RING finger protein 3 [Paramormyrops kingsleyae] | A5D8S5 E3 ubiquitin-protein ligase SH3RF1 OS=Danio rerio OX=7955 GN | JBrowse |
| Actinia equina | EGACTEQ4350017386-PD | KFO79332.1 | E3 ubiquitin-protein ligase SH3RF1, partial [Cuculus canorus] | Q8TEJ3 E3 ubiquitin-protein ligase SH3RF3 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora florida | aflo_s0343.g11.t1 | XP_009047099.1 | hypothetical protein LOTGIDRAFT_230513 [Lottia gigantea] | Q8TEJ3 E3 ubiquitin-protein ligase SH3RF3 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora gemmifera | agem_s0096.g95.t1 | XP_048971328.1 | E3 ubiquitin-protein ligase SH3RF3 isoform X5 [Canis lupus dingo] | Q6NRD3 E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis OX=8355 | JBrowse |
| Acropora hemprichii | Ahemp_014105-T1 | XP_053616335.1 | E3 ubiquitin-protein ligase SH3RF3 isoform X1 [Plodia interpunctella] | A5D8S5 E3 ubiquitin-protein ligase SH3RF1 OS=Danio rerio OX=7955 GN | JBrowse |
