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This orthogroup contains 210 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 210 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12619 | RFX TRANSCRIPTION FACTOR FAMILY | 155 / 210 | 73.8% | 99.4% of 156 | ≥50% support |
| Pfam | PF02257 | RFX_DNA_binding — RFX DNA-binding domain | 162 / 210 | 77.1% | 95.9% of 169 | ≥50% support |
| Pfam | PF18326 | RFX5_N — RFX5 N-terminal domain | 130 / 210 | 61.9% | 76.9% of 169 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 162 / 210 | 77.1% | 99.4% of 163 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 162 / 210 | 77.1% | 99.4% of 163 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 155 / 210 | 73.8% | 95.1% of 163 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 155 / 210 | 73.8% | 95.1% of 163 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 155 / 210 | 73.8% | 95.1% of 163 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 155 / 210 | 73.8% | 95.1% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0001.g146.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Aurelia aurita | scaffold504.g3.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold317.g17.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000033730.1 | XP_029212159.1 | uncharacterized protein LOC114975997 isoform X2 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora austera | ENSKKQP00000033739.1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | Q2KHR2 DNA-binding protein RFX7 OS=Homo sapiens OX=9606 GN=RFX7 PE= | JBrowse |
| Acropora austera | ENSKKQP00000033747.1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora awi | aawi_s0165.g48.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora cervicornis | KAK2565379.1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Aurelia coerulea | evm.model.ptg000037l.117 | EDO41435.1 | predicted protein, partial [Nematostella vectensis] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora cytherea | acyt_s0051.g44.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora digitifera | chr3Alt.g7687.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0026.g56.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Actinia equina | EGACTEQ4350022365-PA | XP_031571541.1 | putative uncharacterized protein DDB_G0291608 [Actinia tenebrosa] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Actinia equina | EGACTEQ4350025699-PA | XP_031571541.1 | putative uncharacterized protein DDB_G0291608 [Actinia tenebrosa] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora florida | aflo_s0006.g108.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora gemmifera | agem_s0028.g52.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora hemprichii | Ahemp_000049-T2 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora hyacinthus | ahya_s0088.g47.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g8766 | XP_031571541.1 | putative uncharacterized protein DDB_G0291608 [Actinia tenebrosa] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
| Acropora intermedia | aint_s0044.g10.t1 | XP_029212158.1 | uncharacterized protein LOC114975997 isoform X1 [Acropora millepora] | A0A1L8H0H2 DNA-binding protein RFX7 OS=Xenopus laevis OX=8355 GN=rfx7.L | JBrowse |
