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This orthogroup contains 209 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 209 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12121 | CARBON CATABOLITE REPRESSOR PROTEIN 4 | 172 / 209 | 82.3% | 99.4% of 173 | ≥80% support |
| GO | GO:0000175 Molecular Function | 3'-5'-RNA exonuclease activity | 172 / 209 | 82.3% | 99.4% of 173 | ≥80% support |
| GO | GO:0000288 Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 171 / 209 | 81.8% | 98.8% of 173 | ≥80% support |
| GO | GO:0005739 Cellular Component | mitochondrion | 171 / 209 | 81.8% | 98.8% of 173 | ≥80% support |
| Pfam | PF21171 | PDE12-like_N — 2',5'-phosphodiesterase 12-like, N-terminal domain | 167 / 209 | 79.9% | 96.0% of 174 | ≥50% support |
| Pfam | PF03372 | Exo_endo_phos — Endonuclease/Exonuclease/phosphatase family | 159 / 209 | 76.1% | 91.4% of 174 | ≥50% support |
| GO | GO:0003824 Molecular Function | catalytic activity | 159 / 209 | 76.1% | 91.9% of 173 | ≥50% support |
| KEGG | K19612 | PDE12 — Mitochondrial biogenesis | 162 / 209 | 77.5% | 99.4% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0086.g11.t1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Alatina alata | Aala_g2041.t1 | XP_020600646.1 | 2',5'-phosphodiesterase 12-like [Orbicella faveolata] | Q6L8Q7 2',5'-phosphodiesterase 12 OS=Homo sapiens OX=9606 GN=PDE12 | JBrowse |
| Alatina alata | Aala_g594.t1 | XP_041479551.1 | uncharacterized protein LOC121427279 [Lytechinus variegatus] | Q8HYN1 Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes | JBrowse |
| Aurelia aurita | scaffold134.g60.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold136.g6.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000052061.1 | XP_029206525.2 | 2',5'-phosphodiesterase 12-like [Acropora millepora] | Q08DF7 2',5'-phosphodiesterase 12 OS=Bos taurus OX=9913 GN=PDE12 PE | JBrowse |
| Acropora austera | ENSKKQP00000052065.1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q08DF7 2',5'-phosphodiesterase 12 OS=Bos taurus OX=9913 GN=PDE12 PE | JBrowse |
| Acropora awi | aawi_s0028.g229.t1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Acropora cervicornis | KAK2554237.1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Aurelia coerulea | evm.model.ptg000004l.770 | EDO45845.1 | predicted protein [Nematostella vectensis] | Q6L8Q7 2',5'-phosphodiesterase 12 OS=Homo sapiens OX=9606 GN=PDE12 | JBrowse |
| Acropora cytherea | acyt_s0006.g10.t1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Acropora digitifera | chr11Alt.g24960.t1 | none | – | JBrowse | |
| Acropora digitifera | chr11Alt.g24966.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0008.g300.t1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Actinia equina | EGACTEQ4350014167-PA | XP_031563424.1 | 2',5'-phosphodiesterase 12-like [Actinia tenebrosa] | Q6L8Q7 2',5'-phosphodiesterase 12 OS=Homo sapiens OX=9606 GN=PDE12 | JBrowse |
| Actinia equina | EGACTEQ4350016285-PA | XP_031563424.1 | 2',5'-phosphodiesterase 12-like [Actinia tenebrosa] | Q6L8Q7 2',5'-phosphodiesterase 12 OS=Homo sapiens OX=9606 GN=PDE12 | JBrowse |
| Acropora florida | aflo_s0035.g231.t1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Acropora gemmifera | agem_s0247.g31.t1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Acropora hemprichii | Ahemp_004699-T1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
| Acropora hyacinthus | ahya_s0016.g7.t1 | XP_015753631.1 | PREDICTED: 2',5'-phosphodiesterase 12-like [Acropora digitifera] | Q3TIU4 2',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 | JBrowse |
