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Support counts the member genes carrying the term. % of genes is that count over all 199 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF21362 | Sina_RING — E3 ubiquitin-protein ligase sina/sinah, RING finger | 167 / 199 | 83.9% | 95.4% of 175 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 169 / 199 | 84.9% | 96.6% of 175 | ≥80% support |
| PANTHER | PTHR45877 | E3 UBIQUITIN-PROTEIN LIGASE SIAH2 | 154 / 199 | 77.4% | 88.0% of 175 | ≥50% support |
| Pfam | PF21361 | Sina_ZnF — Sina, zinc finger | 148 / 199 | 74.4% | 84.6% of 175 | ≥50% support |
| Pfam | PF03145 | Sina_TRAF — Sina, TRAF-like domain | 147 / 199 | 73.9% | 84.0% of 175 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 156 / 199 | 78.4% | 89.1% of 175 | ≥50% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 155 / 199 | 77.9% | 88.6% of 175 | ≥50% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 155 / 199 | 77.9% | 88.6% of 175 | ≥50% support |
| GO | GO:0007275 Biological Process | multicellular organism development | 154 / 199 | 77.4% | 88.0% of 175 | ≥50% support |
| GO | GO:0031624 Molecular Function | ubiquitin conjugating enzyme binding | 154 / 199 | 77.4% | 88.0% of 175 | ≥50% support |
| GO | GO:0043161 Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | 154 / 199 | 77.4% | 88.0% of 175 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 147 / 199 | 73.9% | 84.0% of 175 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0094.g6.t1 | XP_015766642.1 | PREDICTED: E3 ubiquitin-protein ligase Siah1-like [Acropora digitifera] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Aurelia aurita | scaffold20.g85.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000024027.1 | XP_029208814.1 | E3 ubiquitin-protein ligase Siah1-like [Acropora millepora] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora awi | aawi_s0009.g160.t1 | XP_015766642.1 | PREDICTED: E3 ubiquitin-protein ligase Siah1-like [Acropora digitifera] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora cervicornis | KAK2568369.1 | XP_029208814.1 | E3 ubiquitin-protein ligase Siah1-like [Acropora millepora] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora cytherea | acyt_s0021.g10.t1 | XP_029208814.1 | E3 ubiquitin-protein ligase Siah1-like [Acropora millepora] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora digitifera | chr4Alt.g9685.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0035.g54.t1 | XP_029208814.1 | E3 ubiquitin-protein ligase Siah1-like [Acropora millepora] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Actinia equina | EGACTEQ4350017193-PA | XP_031572359.1 | E3 ubiquitin-protein ligase SIAH1-like [Actinia tenebrosa] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Actinia equina | EGACTEQ4350047649-PA | XP_031572359.1 | E3 ubiquitin-protein ligase SIAH1-like [Actinia tenebrosa] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora florida | aflo_s0196.g23.t1 | XP_015766642.1 | PREDICTED: E3 ubiquitin-protein ligase Siah1-like [Acropora digitifera] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora gemmifera | agem_s0128.g46.t1 | XP_015766642.1 | PREDICTED: E3 ubiquitin-protein ligase Siah1-like [Acropora digitifera] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora hemprichii | Ahemp_017062-T1 | XP_029208814.1 | E3 ubiquitin-protein ligase Siah1-like [Acropora millepora] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora hyacinthus | ahya_s0154.g13.t1 | XP_029208814.1 | E3 ubiquitin-protein ligase Siah1-like [Acropora millepora] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g22764 | XP_020916796.1 | E3 ubiquitin-protein ligase SIAH1 [Exaiptasia diaphana] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Acropora intermedia | aint_s0013.g48.t1 | XP_015766642.1 | PREDICTED: E3 ubiquitin-protein ligase Siah1-like [Acropora digitifera] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Actinoscyphia liui | gene21405.t1 | XP_020916796.1 | E3 ubiquitin-protein ligase SIAH1 [Exaiptasia diaphana] | Q7ZVG6 E3 ubiquitin-protein ligase Siah1 OS=Danio rerio OX=7955 GN= | JBrowse |
| Actinoscyphia liui | gene21446.t1 | XP_020916796.1 | E3 ubiquitin-protein ligase SIAH1 [Exaiptasia diaphana] | Q7ZVG6 E3 ubiquitin-protein ligase Siah1 OS=Danio rerio OX=7955 GN= | JBrowse |
| Acropora loripes | alor_g1364.t1 | XP_029208814.1 | E3 ubiquitin-protein ligase Siah1-like [Acropora millepora] | P61092 E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 | JBrowse |
| Actinia mediterranea | ENSQPTP00000016613.1 | none | – | JBrowse |
