← Back to the gene family browser
This orthogroup contains 199 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 199 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13452 | THUMP DOMAIN CONTAINING PROTEIN 1-RELATED | 175 / 199 | 87.9% | 99.4% of 176 | ≥80% support |
| Pfam | PF02926 | THUMP | 166 / 199 | 83.4% | 99.4% of 167 | ≥80% support |
| GO | GO:0006400 Biological Process | tRNA modification | 176 / 199 | 88.4% | 100.0% of 176 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 175 / 199 | 87.9% | 99.4% of 176 | ≥80% support |
| KEGG | K06963 | TAN1, THUMPD1 — Transfer RNA biogenesis | 141 / 199 | 70.9% | 100.0% of 141 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0187.g40.t1 | XP_015750825.1 | PREDICTED: THUMP domain-containing protein 1-like [Acropora digitifera] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Alatina alata | Aala_g2635.t1 | XP_047125188.1 | uncharacterized protein LOC124807382 [Hydra vulgaris] | A7SNN9 Queuosine 5'-phosphate N-glycosylase/hydrolase OS=Nematostel | JBrowse |
| Aurelia aurita | scaffold215.g15.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold215.g15.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000045793.1 | XP_029201289.2 | THUMP domain-containing protein 1-like [Acropora millepora] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora austera | ENSKKQP00000045806.1 | XP_029201289.2 | THUMP domain-containing protein 1-like [Acropora millepora] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora awi | aawi_s0034.g41.t1 | XP_029201289.2 | THUMP domain-containing protein 1-like [Acropora millepora] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora cervicornis | KAK2561440.1 | XP_029201289.2 | THUMP domain-containing protein 1-like [Acropora millepora] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora cytherea | acyt_s0018.g4.t1 | XP_015770986.1 | PREDICTED: THUMP domain-containing protein 1-like [Acropora digitifera] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora digitifera | chr8Alt.g18504.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0055.g46.t1 | XP_029201289.2 | THUMP domain-containing protein 1-like [Acropora millepora] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Actinia equina | EGACTEQ4350036758-PA | XP_031573977.1 | THUMP domain-containing protein 1-like [Actinia tenebrosa] | Q9NXG2 THUMP domain-containing protein 1 OS=Homo sapiens OX=9606 GN | JBrowse |
| Actinia equina | EGACTEQ4350036758-PB | XP_031573977.1 | THUMP domain-containing protein 1-like [Actinia tenebrosa] | Q9NXG2 THUMP domain-containing protein 1 OS=Homo sapiens OX=9606 GN | JBrowse |
| Acropora florida | aflo_s0048.g50.t1 | XP_015750825.1 | PREDICTED: THUMP domain-containing protein 1-like [Acropora digitifera] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora gemmifera | agem_s0006.g142.t1 | XP_015750825.1 | PREDICTED: THUMP domain-containing protein 1-like [Acropora digitifera] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora hemprichii | Ahemp_002728-T1 | XP_015750825.1 | PREDICTED: THUMP domain-containing protein 1-like [Acropora digitifera] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora hyacinthus | ahya_s0065.g71.t1 | XP_029201289.2 | THUMP domain-containing protein 1-like [Acropora millepora] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g2537 | XP_020906833.2 | THUMP domain-containing protein 1 [Exaiptasia diaphana] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g2558 | XP_020906833.2 | THUMP domain-containing protein 1 [Exaiptasia diaphana] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
| Acropora intermedia | aint_s0125.g5.t1 | XP_029201289.2 | THUMP domain-containing protein 1-like [Acropora millepora] | Q24K03 THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=T | JBrowse |
