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Support counts the member genes carrying the term. % of genes is that count over all 193 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12121 | CARBON CATABOLITE REPRESSOR PROTEIN 4 | 158 / 193 | 81.9% | 95.2% of 166 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 160 / 193 | 82.9% | 96.4% of 166 | ≥80% support |
| GO | GO:0000175 Molecular Function | 3'-5'-RNA exonuclease activity | 158 / 193 | 81.9% | 95.2% of 166 | ≥80% support |
| GO | GO:0000289 Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | 158 / 193 | 81.9% | 95.2% of 166 | ≥80% support |
| GO | GO:0004535 Molecular Function | poly(A)-specific ribonuclease activity | 158 / 193 | 81.9% | 95.2% of 166 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 158 / 193 | 81.9% | 95.2% of 166 | ≥80% support |
| GO | GO:0030014 Cellular Component | CCR4-NOT complex | 158 / 193 | 81.9% | 95.2% of 166 | ≥80% support |
| Pfam | PF03372 | Exo_endo_phos — Endonuclease/Exonuclease/phosphatase family | 149 / 193 | 77.2% | 94.9% of 157 | ≥50% support |
| Pfam | PF13855 | LRR_8 — Leucine rich repeat | 121 / 193 | 62.7% | 77.1% of 157 | ≥50% support |
| GO | GO:0003824 Molecular Function | catalytic activity | 150 / 193 | 77.7% | 90.4% of 166 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 137 / 193 | 71.0% | 82.5% of 166 | ≥50% support |
| KEGG | K12603 | CNOT6, CCR4 — Messenger RNA biogenesis | 117 / 193 | 60.6% | 98.3% of 119 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0023.g21.t1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | Q8VEG6 CCR4-NOT transcription complex subunit 6-like OS=Mus musculu | JBrowse |
| Aurelia aurita | scaffold9.g56.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold787.g6.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold787.g6.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000031076.1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | Q8VEG6 CCR4-NOT transcription complex subunit 6-like OS=Mus musculu | JBrowse |
| Acropora awi | aawi_s0027.g26.t1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | Q8VEG6 CCR4-NOT transcription complex subunit 6-like OS=Mus musculu | JBrowse |
| Acropora cervicornis | KAK2572958.1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | Q8VEG6 CCR4-NOT transcription complex subunit 6-like OS=Mus musculu | JBrowse |
| Acropora cytherea | acyt_s0186.g25.t1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | A2BHJ4 CCR4-NOT transcription complex subunit 6-like OS=Danio rerio | JBrowse |
| Acropora digitifera | chr3Alt.g6958.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0050.g57.t1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | A2BHJ4 CCR4-NOT transcription complex subunit 6-like OS=Danio rerio | JBrowse |
| Actinia equina | EGACTEQ4350000415-PA | XP_031556007.1 | CCR4-NOT transcription complex subunit 6-like [Actinia tenebrosa] | Q9ULM6 CCR4-NOT transcription complex subunit 6 OS=Homo sapiens OX= | JBrowse |
| Actinia equina | EGACTEQ4350000415-PB | XP_031556007.1 | CCR4-NOT transcription complex subunit 6-like [Actinia tenebrosa] | Q96LI5 CCR4-NOT transcription complex subunit 6-like OS=Homo sapien | JBrowse |
| Actinia equina | EGACTEQ4350004981-PA | XP_031556007.1 | CCR4-NOT transcription complex subunit 6-like [Actinia tenebrosa] | Q9ULM6 CCR4-NOT transcription complex subunit 6 OS=Homo sapiens OX= | JBrowse |
| Actinia equina | EGACTEQ4350004981-PB | XP_031556007.1 | CCR4-NOT transcription complex subunit 6-like [Actinia tenebrosa] | Q96LI5 CCR4-NOT transcription complex subunit 6-like OS=Homo sapien | JBrowse |
| Acropora florida | aflo_s0240.g34.t1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | Q8VEG6 CCR4-NOT transcription complex subunit 6-like OS=Mus musculu | JBrowse |
| Acropora gemmifera | agem_s0033.g105.t1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | Q8VEG6 CCR4-NOT transcription complex subunit 6-like OS=Mus musculu | JBrowse |
| Acropora hemprichii | Ahemp_000597-T1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | Q8VEG6 CCR4-NOT transcription complex subunit 6-like OS=Mus musculu | JBrowse |
| Acropora hemprichii | Ahemp_000598-T1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | A2BHJ4 CCR4-NOT transcription complex subunit 6-like OS=Danio rerio | JBrowse |
| Acropora hyacinthus | ahya_s0064.g22.t1 | XP_029197880.2 | LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like [Acropora millepora] | A2BHJ4 CCR4-NOT transcription complex subunit 6-like OS=Danio rerio | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29445 | XP_020902775.1 | CCR4-NOT transcription complex subunit 6-like [Exaiptasia diaphana] | A2BHJ4 CCR4-NOT transcription complex subunit 6-like OS=Danio rerio | JBrowse |
