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This orthogroup contains 193 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 193 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45880 | RNA-BINDING MOTIF PROTEIN, X-LINKED 2 | 167 / 193 | 86.5% | 100.0% of 167 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 166 / 193 | 86.0% | 100.0% of 166 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 167 / 193 | 86.5% | 100.0% of 167 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 167 / 193 | 86.5% | 100.0% of 167 | ≥80% support |
| GO | GO:0005686 Cellular Component | U2 snRNP | 167 / 193 | 86.5% | 100.0% of 167 | ≥80% support |
| GO | GO:0071011 Cellular Component | precatalytic spliceosome | 167 / 193 | 86.5% | 100.0% of 167 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 167 / 193 | 86.5% | 100.0% of 167 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 166 / 193 | 86.0% | 99.4% of 167 | ≥80% support |
| KEGG | K13107 | RBMX2, IST3 — Spliceosome | 161 / 193 | 83.4% | 99.4% of 162 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0083.g107.t1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Aurelia aurita complex sp. Pacific | scaffold2063.g1.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000036949.1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora awi | aawi_s0065.g122.t1 | XP_029189203.1 | RNA-binding motif protein, X-linked 2-like isoform X2 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora awi | aawi_s0065.g122.t2 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora cervicornis | KAK2573237.1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora cytherea | acyt_s0022.g114.t1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora digitifera | chr1Alt.g2311.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0002.g162.t1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Actinia equina | EGACTEQ4350005215-PA | XP_031554896.1 | RNA-binding motif protein, X-linked 2-like [Actinia tenebrosa] | Q9Y388 RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=960 | JBrowse |
| Actinia equina | EGACTEQ4350023111-PA | XP_031554896.1 | RNA-binding motif protein, X-linked 2-like [Actinia tenebrosa] | Q9Y388 RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=960 | JBrowse |
| Acropora florida | aflo_s0047.g68.t1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora gemmifera | agem_s0065.g15.t1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora hemprichii | Ahemp_013009-T1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora hyacinthus | ahya_s0001.g739.t1 | XP_029189203.1 | RNA-binding motif protein, X-linked 2-like isoform X2 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Acropora hyacinthus | ahya_s0001.g739.t2 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g10409 | XP_020908100.1 | RNA-binding motif protein, X-linked 2 [Exaiptasia diaphana] | Q9Y388 RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=960 | JBrowse |
| Acropora intermedia | aint_s0077.g22.t1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
| Actinoscyphia liui | gene16284.t1 | XP_020908100.1 | RNA-binding motif protein, X-linked 2 [Exaiptasia diaphana] | Q9Y388 RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=960 | JBrowse |
| Acropora loripes | alor_g26709.t1 | XP_029189196.1 | RNA-binding motif protein, X-linked 2-like isoform X1 [Acropora millepora] | B0BN49 RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus O | JBrowse |
