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This orthogroup contains 187 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 187 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12930 | ZINC FINGER PROTEIN 183 | 166 / 187 | 88.8% | 99.4% of 167 | ≥80% support |
| Pfam | PF00642 | zf-CCCH — Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 157 / 187 | 84.0% | 98.7% of 159 | ≥80% support |
| GO | GO:0005684 Cellular Component | U2-type spliceosomal complex | 166 / 187 | 88.8% | 100.0% of 166 | ≥80% support |
| GO | GO:0034247 Biological Process | snoRNA splicing | 166 / 187 | 88.8% | 100.0% of 166 | ≥80% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 157 / 187 | 84.0% | 94.6% of 166 | ≥80% support |
| KEGG | K13127 | RNF113A, CWC24 — Spliceosome | 153 / 187 | 81.8% | 99.4% of 154 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0185.g33.t1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Alatina alata | Aala_g166.t1 | CAH1241681.1 | RNF113A [Branchiostoma lanceolatum] | Q67ER4 E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN | JBrowse |
| Alatina alata | Aala_g213.t1 | KFD62568.1 | LOW QUALITY PROTEIN: hypothetical protein M514_25304 [Trichuris suis] | Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus OS=D | JBrowse |
| Aurelia aurita | scaffold56.g86.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold56.g87.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold56.g88.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold23.g55.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000028365.1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Acropora awi | aawi_s0017.g54.t1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Acropora cervicornis | KAK2571403.1 | XP_029196962.2 | uncharacterized protein LOC114962188 isoform X2 [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Aurelia coerulea | evm.model.ptg000004l.113 | CAH3150894.1 | unnamed protein product [Porites lobata] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Aurelia coerulea | evm.model.ptg000004l.114 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Acropora cytherea | acyt_s0158.g21.t1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Acropora cytherea | acyt_s0158.g23.t1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
| Acropora digitifera | chr6Alt.g14406.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0014.g100.t1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | Q67ER4 E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN | JBrowse |
| Actinia equina | EGACTEQ4350033391-PA | XP_031559453.1 | E3 ubiquitin-protein ligase RNF113A-like [Actinia tenebrosa] | Q67ER4 E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN | JBrowse |
| Actinia equina | EGACTEQ4350037120-PA | XP_031559453.1 | E3 ubiquitin-protein ligase RNF113A-like [Actinia tenebrosa] | Q67ER4 E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN | JBrowse |
| Acropora florida | aflo_s0109.g49.t1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | Q67ER4 E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN | JBrowse |
| Acropora gemmifera | agem_s0019.g179.t1 | XP_029196963.2 | E3 ubiquitin-protein ligase RNF113A-like [Acropora millepora] | O15541 E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 | JBrowse |
