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This orthogroup contains 181 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 181 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10855 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 | 159 / 181 | 87.9% | 98.8% of 161 | ≥80% support |
| Pfam | PF01399 | PCI | 152 / 181 | 84.0% | 97.4% of 156 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 160 / 181 | 88.4% | 100.0% of 160 | ≥80% support |
| GO | GO:0008180 Cellular Component | COP9 signalosome | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| Pfam | PF18420 | CSN4_RPN5_eIF3a — CSN4/RPN5/eIF3a helix turn helix domain | 141 / 181 | 77.9% | 90.4% of 156 | ≥50% support |
| KEGG | K12178 | COPS4, CSN4 — Ubiquitin system | 141 / 181 | 77.9% | 99.3% of 142 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0134.g50.t1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Alatina alata | Aala_g2156.t1 | KAG1949149.1 | hypothetical protein F2P79_011962 [Pimephales promelas] | Q3SZA0 COP9 signalosome complex subunit 4 OS=Bos taurus OX=9913 GN= | JBrowse |
| Aurelia aurita | scaffold42.g5.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold42.g5.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold89.g31.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000030627.1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora austera | ENSKKQP00000030634.1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora austera | ENSKKQP00000030646.1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora awi | aawi_s0048.g28.t1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora cervicornis | KAK2563661.1 | XP_015760719.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X1 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Aurelia coerulea | evm.model.ptg000006l.133 | CAH3173895.1 | unnamed protein product [Porites lobata] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora cytherea | acyt_s0367.g5.t1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora digitifera | chr3Alt.g7265.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0036.g102.t1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | O88544 COP9 signalosome complex subunit 4 OS=Mus musculus OX=10090 | JBrowse |
| Actinia equina | EGACTEQ4350010677-PA | XP_031553705.1 | COP9 signalosome complex subunit 4-like [Actinia tenebrosa] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Actinia equina | EGACTEQ4350054594-PA | XP_031553705.1 | COP9 signalosome complex subunit 4-like [Actinia tenebrosa] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora florida | aflo_s0089.g28.t1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora gemmifera | agem_s0012.g84.t1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | O88544 COP9 signalosome complex subunit 4 OS=Mus musculus OX=10090 | JBrowse |
| Acropora hemprichii | Ahemp_000368-T1 | XP_015760719.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X1 [Acropora digitifera] | O88544 COP9 signalosome complex subunit 4 OS=Mus musculus OX=10090 | JBrowse |
| Acropora hyacinthus | ahya_s0155.g27.t1 | XP_015760720.1 | PREDICTED: COP9 signalosome complex subunit 4-like isoform X2 [Acropora digitifera] | Q6P0H6 COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN | JBrowse |
