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This orthogroup contains 181 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 181 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21141 | 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER | 159 / 181 | 87.9% | 100.0% of 159 | ≥80% support |
| Pfam | PF00428 | Ribosomal_60s — 60s Acidic ribosomal protein | 152 / 181 | 84.0% | 100.0% of 152 | ≥80% support |
| GO | GO:0002182 Biological Process | cytoplasmic translational elongation | 159 / 181 | 87.9% | 100.0% of 159 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 159 / 181 | 87.9% | 100.0% of 159 | ≥80% support |
| GO | GO:0022625 Cellular Component | cytosolic large ribosomal subunit | 159 / 181 | 87.9% | 100.0% of 159 | ≥80% support |
| GO | GO:0005840 Cellular Component | ribosome | 144 / 181 | 79.6% | 90.6% of 159 | ≥50% support |
| GO | GO:0006414 Biological Process | translational elongation | 144 / 181 | 79.6% | 90.6% of 159 | ≥50% support |
| KEGG | K02943 | RP-LP2, RPLP2 — Ribosome | 144 / 181 | 79.6% | 100.0% of 144 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0318.g10.t1 | XP_044174002.1 | 60S acidic ribosomal protein P2-like [Acropora millepora] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Aurelia aurita | scaffold63.g71.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000044496.1 | XP_015763719.1 | PREDICTED: 60S acidic ribosomal protein P2-like [Acropora digitifera] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora awi | aawi_s0086.g18.t1 | XP_015763719.1 | PREDICTED: 60S acidic ribosomal protein P2-like [Acropora digitifera] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora cervicornis | KAK2556285.1 | XP_044174002.1 | 60S acidic ribosomal protein P2-like [Acropora millepora] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora cytherea | acyt_s0198.g12.t1 | XP_044174002.1 | 60S acidic ribosomal protein P2-like [Acropora millepora] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora digitifera | chr9Alt.g20248.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0118.g10.t1 | XP_044174002.1 | 60S acidic ribosomal protein P2-like [Acropora millepora] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Actinia equina | EGACTEQ4350010084-PA | XP_031553253.1 | 60S acidic ribosomal protein P2-like [Actinia tenebrosa] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Actinia equina | EGACTEQ4350016697-PA | XP_031553253.1 | 60S acidic ribosomal protein P2-like [Actinia tenebrosa] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora florida | aflo_s0377.g9.t1 | XP_044174002.1 | 60S acidic ribosomal protein P2-like [Acropora millepora] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora gemmifera | agem_s0271.g10.t1 | XP_015763719.1 | PREDICTED: 60S acidic ribosomal protein P2-like [Acropora digitifera] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora hemprichii | Ahemp_014796-T1 | XP_015763719.1 | PREDICTED: 60S acidic ribosomal protein P2-like [Acropora digitifera] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora hyacinthus | ahya_s0104.g18.t1 | XP_044174002.1 | 60S acidic ribosomal protein P2-like [Acropora millepora] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g7086 | XP_031553253.1 | 60S acidic ribosomal protein P2-like [Actinia tenebrosa] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora intermedia | aint_s0126.g18.t1 | XP_015763719.1 | PREDICTED: 60S acidic ribosomal protein P2-like [Acropora digitifera] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Actinoscyphia liui | gene07255.t1 | XP_031553253.1 | 60S acidic ribosomal protein P2-like [Actinia tenebrosa] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora loripes | alor_g20096.t1 | XP_044174002.1 | 60S acidic ribosomal protein P2-like [Acropora millepora] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Actinia mediterranea | ENSQPTP00000028785.1 | XP_031553253.1 | 60S acidic ribosomal protein P2-like [Actinia tenebrosa] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
| Actinia mediterranea | ENSQPTP00000069454.1 | XP_031553253.1 | 60S acidic ribosomal protein P2-like [Actinia tenebrosa] | P02401 Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=1 | JBrowse |
