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This orthogroup contains 181 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 181 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10917 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 | 159 / 181 | 87.9% | 100.0% of 159 | ≥80% support |
| Pfam | PF03870 | RNA_pol_Rpb8 — RNA polymerase Rpb8 | 160 / 181 | 88.4% | 100.0% of 160 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 160 / 181 | 88.4% | 100.0% of 160 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 160 / 181 | 88.4% | 100.0% of 160 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| GO | GO:0001055 Molecular Function | RNA polymerase II activity | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| GO | GO:0001056 Molecular Function | RNA polymerase III activity | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 159 / 181 | 87.9% | 99.4% of 160 | ≥80% support |
| KEGG | K03016 | RPABC3, RPB8, POLR2H — DNA repair and recombination proteins | 155 / 181 | 85.6% | 100.0% of 155 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0106.g21.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Aurelia aurita | scaffold273.g19.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold273.g21.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000037161.1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora austera | ENSKKQP00000037169.1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora awi | aawi_s0104.g67.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora cervicornis | KAK2565040.1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora cytherea | acyt_s0191.g15.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora digitifera | chr1Alt.g12.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s1499.g2.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Actinia equina | EGACTEQ4350013973-PA | XP_031557303.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Actinia tenebrosa] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Actinia equina | EGACTEQ4350027715-PA | XP_031557303.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Actinia tenebrosa] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora florida | aflo_s0292.g16.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora gemmifera | agem_s0089.g53.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora hemprichii | Ahemp_018342-T1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora hemprichii | Ahemp_027303-T1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora hyacinthus | ahya_s0162.g13.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g9939 | XP_020899266.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Exaiptasia diaphana] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Acropora intermedia | aint_s0332.g21.t1 | XP_015761937.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Acropora digitifera] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
| Actinoscyphia liui | gene15840.t1 | XP_031557303.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Actinia tenebrosa] | F2Z4H3 DNA-directed RNA polymerases I, II, and III subunit RPABC3 O | JBrowse |
