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This orthogroup contains 178 genes from 133 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 178 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10026 | CYCLIN | 159 / 178 | 89.3% | 100.0% of 159 | ≥80% support |
| Pfam | PF16899 | Cyclin_C_2 — Cyclin C-terminal domain | 147 / 178 | 82.6% | 93.6% of 157 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 159 / 178 | 89.3% | 100.0% of 159 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 159 / 178 | 89.3% | 100.0% of 159 | ≥80% support |
| GO | GO:0016538 Molecular Function | cyclin-dependent protein serine/threonine kinase regulator activity | 159 / 178 | 89.3% | 100.0% of 159 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 159 / 178 | 89.3% | 100.0% of 159 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 159 / 178 | 89.3% | 100.0% of 159 | ≥80% support |
| KEGG | K15161 | CCNC, SSN8 — Transcription machinery | 152 / 178 | 85.4% | 100.0% of 152 | ≥80% support |
| Pfam | PF00134 | Cyclin_N — Cyclin, N-terminal domain | 138 / 178 | 77.5% | 87.9% of 157 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0036.g51.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Aurelia aurita complex sp. Pacific | scaffold434.g8.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold434.g8.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold434.g8.t3 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000023615.1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora awi | aawi_s0004.g353.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora cervicornis | KAK2568149.1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora cytherea | acyt_s0014.g227.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora digitifera | chr4Alt.g10086.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0021.g153.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Actinia equina | EGACTEQ4350046335-PA | XP_031561659.1 | cyclin-C-like [Actinia tenebrosa] | Q28F72 Cyclin-C OS=Xenopus tropicalis OX=8364 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora florida | aflo_s0033.g110.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora gemmifera | agem_s0029.g68.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora hemprichii | Ahemp_003582-T1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | P55168 Cyclin-C OS=Gallus gallus OX=9031 GN=CCNC PE=3 SV=1 | JBrowse |
| Acropora hyacinthus | ahya_s0015.g20.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora hyacinthus | ahya_s0015.g22.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21231 | XP_031561659.1 | cyclin-C-like [Actinia tenebrosa] | Q28F72 Cyclin-C OS=Xenopus tropicalis OX=8364 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora intermedia | aint_s0103.g48.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
| Actinoscyphia liui | gene23173.t1 | XP_031561659.1 | cyclin-C-like [Actinia tenebrosa] | Q28F72 Cyclin-C OS=Xenopus tropicalis OX=8364 GN=ccnc PE=2 SV=1 | JBrowse |
| Acropora loripes | alor_g419.t1 | XP_015766656.1 | PREDICTED: cyclin-C-like [Acropora digitifera] | Q4KLA0 Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1 | JBrowse |
