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This orthogroup contains 167 genes from 129 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 167 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR31489 | LIN52 FAMILY MEMBER | 145 / 167 | 86.8% | 98.6% of 147 | ≥80% support |
| Pfam | PF10044 | LIN52 — Retinal tissue protein | 150 / 167 | 89.8% | 100.0% of 150 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 150 / 167 | 89.8% | 100.0% of 150 | ≥80% support |
| GO | GO:0070176 Cellular Component | DRM complex | 150 / 167 | 89.8% | 100.0% of 150 | ≥80% support |
| KEGG | K21775 | LIN52 — Cellular senescence | 129 / 167 | 77.3% | 100.0% of 129 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0081.g71.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Aurelia aurita | scaffold55.g20.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold29.g48.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000016955.1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora awi | aawi_s0024.g98.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora cervicornis | KAK2560589.1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora digitifera | chr11Alt.g23183.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0052.g9.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Actinia equina | EGACTEQ4350012463-PA | XP_022785302.1 | protein lin-52 homolog isoform X2 [Stylophora pistillata] | – | JBrowse |
| Actinia equina | EGACTEQ4350012463-PB | XP_031561562.1 | protein lin-52 homolog [Actinia tenebrosa] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Actinia equina | EGACTEQ4350027545-PA | XP_031561562.1 | protein lin-52 homolog [Actinia tenebrosa] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora florida | aflo_s0374.g18.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora gemmifera | agem_s0007.g157.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora hemprichii | Ahemp_017805-T1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5ZJQ3 Protein lin-52 homolog OS=Gallus gallus OX=9031 GN=LIN52 PE= | JBrowse |
| Acropora hyacinthus | ahya_s0196.g18.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora intermedia | aint_s0337.g16.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Actinoscyphia liui | gene12596.t1 | XP_031561562.1 | protein lin-52 homolog [Actinia tenebrosa] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Actinoscyphia liui | gene12596.t2 | XP_031561562.1 | protein lin-52 homolog [Actinia tenebrosa] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Acropora loripes | alor_g7032.t1 | XP_015762846.1 | PREDICTED: protein lin-52 homolog [Acropora digitifera] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
| Actinia mediterranea | ENSQPTP00000002466.1 | XP_031561562.1 | protein lin-52 homolog [Actinia tenebrosa] | Q5NVP8 Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 | JBrowse |
