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Support counts the member genes carrying the term. % of genes is that count over all 146 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11239 | DNA-DIRECTED RNA POLYMERASE | 124 / 146 | 84.9% | 99.2% of 125 | ≥80% support |
| Pfam | PF01096 | TFIIS_C — Transcription factor S-II (TFIIS) | 126 / 146 | 86.3% | 100.0% of 126 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 128 / 146 | 87.7% | 100.0% of 128 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 126 / 146 | 86.3% | 98.4% of 128 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 126 / 146 | 86.3% | 98.4% of 128 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 124 / 146 | 84.9% | 96.9% of 128 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 124 / 146 | 84.9% | 96.9% of 128 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 124 / 146 | 84.9% | 96.9% of 128 | ≥80% support |
| GO | GO:0006363 Biological Process | termination of RNA polymerase I transcription | 124 / 146 | 84.9% | 96.9% of 128 | ≥80% support |
| KEGG | K03000 | RPA12, POLR1H, ZNRD1 — Transcription machinery | 122 / 146 | 83.6% | 100.0% of 122 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0331.g25.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Aurelia aurita | scaffold73.g66.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000036831.1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora awi | aawi_s0133.g60.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Aurelia coerulea | evm.model.ptg000011l.232 | XP_031552032.1 | DNA-directed RNA polymerase I subunit RPA12-like [Actinia tenebrosa] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora cytherea | acyt_s0025.g25.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora digitifera | chr1Alt.g2041.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0203.g25.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Actinia equina | EGACTEQ4350006803-PA | XP_031552032.1 | DNA-directed RNA polymerase I subunit RPA12-like [Actinia tenebrosa] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Actinia equina | EGACTEQ4350008096-PA | XP_031552032.1 | DNA-directed RNA polymerase I subunit RPA12-like [Actinia tenebrosa] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora florida | aflo_s0215.g17.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora gemmifera | agem_s0015.g136.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora hemprichii | Ahemp_011422-T1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora hyacinthus | ahya_s0152.g82.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12614 | XP_031552032.1 | DNA-directed RNA polymerase I subunit RPA12-like [Actinia tenebrosa] | Q6MFY5 DNA-directed RNA polymerase I subunit RPA12 OS=Rattus norveg | JBrowse |
| Acropora intermedia | aint_s0415.g6.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Actinoscyphia liui | gene14864.t1 | XP_031552032.1 | DNA-directed RNA polymerase I subunit RPA12-like [Actinia tenebrosa] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Acropora loripes | alor_g13765.t1 | XP_029186129.1 | DNA-directed RNA polymerase I subunit RPA12-like [Acropora millepora] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Actinia mediterranea | ENSQPTP00000008888.1 | XP_031552032.1 | DNA-directed RNA polymerase I subunit RPA12-like [Actinia tenebrosa] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
| Actinia mediterranea | ENSQPTP00000011258.1 | XP_031552032.1 | DNA-directed RNA polymerase I subunit RPA12-like [Actinia tenebrosa] | Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 OS=Bos taurus OX | JBrowse |
