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Support counts the member genes carrying the term. % of genes is that count over all 137 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21196 | U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10 | 122 / 137 | 89.1% | 100.0% of 122 | ≥80% support |
| Pfam | PF01423 | LSM | 121 / 137 | 88.3% | 100.0% of 121 | ≥80% support |
| GO | GO:0006398 Biological Process | mRNA 3'-end processing by stem-loop binding and cleavage | 122 / 137 | 89.1% | 100.0% of 122 | ≥80% support |
| GO | GO:0016604 Cellular Component | nuclear body | 122 / 137 | 89.1% | 100.0% of 122 | ≥80% support |
| GO | GO:0071208 Molecular Function | histone pre-mRNA DCP binding | 122 / 137 | 89.1% | 100.0% of 122 | ≥80% support |
| GO | GO:0071209 Molecular Function | U7 snRNA binding | 122 / 137 | 89.1% | 100.0% of 122 | ≥80% support |
| GO | GO:0071254 Cellular Component | cytoplasmic U snRNP body | 122 / 137 | 89.1% | 100.0% of 122 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 73 / 137 | 53.3% | 59.8% of 122 | ≥50% support |
| KEGG | K25591 | LSM10 — Messenger RNA biogenesis | 97 / 137 | 70.8% | 100.0% of 97 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alatina alata | Aala_g293.t1 | KAJ8318418.1 | hypothetical protein KUTeg_003509 [Tegillarca granosa] | P18700 Tubulin beta chain (Fragment) OS=Strongylocentrotus purpurat | JBrowse |
| Acropora austera | ENSKKQP00000007549.1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora awi | aawi_s0002.g166.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora cervicornis | KAK2558093.1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.1025 | CAH3126347.1 | unnamed protein product [Porites lobata] | Q969L4 U7 snRNA-associated Sm-like protein LSm10 OS=Homo sapiens OX | JBrowse |
| Acropora cytherea | acyt_s0005.g19.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora cytherea | acyt_s0763.g3.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora digitifera | chr12Alt.g25676.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0003.g499.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Actinia equina | EGACTEQ4350045073-PA | XP_031574663.1 | U7 snRNA-associated Sm-like protein LSm10 [Actinia tenebrosa] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Actinia equina | EGACTEQ4350050909-PA | XP_031574663.1 | U7 snRNA-associated Sm-like protein LSm10 [Actinia tenebrosa] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora florida | aflo_s0076.g66.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora gemmifera | agem_s0053.g90.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora hemprichii | Ahemp_001456-T1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora hyacinthus | ahya_s0020.g78.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g4207 | XP_020908208.1 | U7 snRNA-associated Sm-like protein LSm10 [Exaiptasia diaphana] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Acropora intermedia | aint_s0001.g35.t1 | XP_044178590.1 | U7 snRNA-associated Sm-like protein LSm10 [Acropora millepora] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Actinoscyphia liui | gene29340.t1 | XP_020908208.1 | U7 snRNA-associated Sm-like protein LSm10 [Exaiptasia diaphana] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Actinia mediterranea | ENSQPTP00000015852.1 | XP_031574663.1 | U7 snRNA-associated Sm-like protein LSm10 [Actinia tenebrosa] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
| Actinia mediterranea | ENSQPTP00000058769.1 | XP_031574663.1 | U7 snRNA-associated Sm-like protein LSm10 [Actinia tenebrosa] | Q8QZX5 U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX | JBrowse |
