← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 69 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23431 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| Pfam | PF01194 | RNA_pol_N — RNA polymerases N / 8 kDa subunit | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001055 Molecular Function | RNA polymerase II activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001056 Molecular Function | RNA polymerase III activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006360 Biological Process | transcription by RNA polymerase I | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006366 Biological Process | transcription by RNA polymerase II | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0042797 Biological Process | tRNA transcription by RNA polymerase III | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| KEGG | K03007 | RPABC5, RPB10, POLR2L — DNA repair and recombination proteins | 59 / 69 | 85.5% | 100.0% of 59 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0018.g93.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora awi | aawi_s0009.g79.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora cervicornis | KAK2573866.1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora cytherea | acyt_s0057.g43.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora digitifera | chr1Alt.g2125.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0002.g327.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Actinia equina | EGACTEQ4350031933-PA | XP_034017716.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Thalassophryne amazonica] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora florida | aflo_s0025.g74.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora gemmifera | agem_s0015.g76.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora hyacinthus | ahya_s0001.g906.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora intermedia | aint_s0312.g21.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora intermedia | aint_s0312.g21.t2 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Actinoscyphia liui | gene16051.t1 | XP_034017716.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Thalassophryne amazonica] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora loripes | alor_g24115.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora microphthalma | amic_s0023.g271.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora muricata | amur_s0087.g55.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora palmata | XP_074634392.1 | XP_053308524.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5-like [Spea bombifrons] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Astrangia poculata | evm.model.Ap8.2713 | PFX25841.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Stylophora pistillata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora pulchra | FUN_041711-T1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora selago | asel_s0001.g4.t1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
