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Support counts the member genes carrying the term. % of genes is that count over all 69 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23431 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| Pfam | PF01194 | RNA_pol_N — RNA polymerases N / 8 kDa subunit | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001055 Molecular Function | RNA polymerase II activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0001056 Molecular Function | RNA polymerase III activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006360 Biological Process | transcription by RNA polymerase I | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0006366 Biological Process | transcription by RNA polymerase II | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| GO | GO:0042797 Biological Process | tRNA transcription by RNA polymerase III | 61 / 69 | 88.4% | 100.0% of 61 | ≥80% support |
| KEGG | K03007 | RPABC5, RPB10, POLR2L — DNA repair and recombination proteins | 59 / 69 | 85.5% | 100.0% of 59 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora tenuis | aten_s0009.g79.t1 | XP_053308524.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5-like [Spea bombifrons] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Acropora yongei | ayon_s0078.g182.t1 | XP_053308524.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5-like [Spea bombifrons] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Bougainvillia cf. muscus | g21126.t1 | none | – | JBrowse | |
| Cladopsammia gracilis | BRAKERTYJP00000016890.1 | none | – | JBrowse | |
| Colpophyllia natans | FUN_008301-T1 | RMX60746.1 | hypothetical protein pdam_00014294 [Pocillopora damicornis] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Chrysogorgia sp. JL179-B06 | Csp0G149250 | none | – | JBrowse | |
| Dendrophyllia cribrosa | BRAKERRLHP00000036298.1 | CAH3191238.1 | unnamed protein product [Porites evermanni] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Dendrophyllia cribrosa | g38166.t1.1 | none | – | JBrowse | |
| Eunicella cavolini | ENSLDHP00000034278.1 | CAB4034082.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Paramuricea clavata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Exaiptasia diaphana | KXJ17276.1 | XP_034017716.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Thalassophryne amazonica] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Fimbriaphyllia ancora | eanc_s027.g0011.t1 | CAH3191238.1 | unnamed protein product [Porites evermanni] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Galaxea fascicularis | gfas1.m1.917.m1 | CAH3197150.1 | unnamed protein product [Porites evermanni] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Heliopora coerulea | ENSBQFP00000003216.1 | KAG8001579.1 | DNA-directed RNA polymerases I [Nibea albiflora] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Hydra oligactis | HOLI00277.G3708 | XP_033110777.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Anneissia japonica] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Hydra viridissima | BRAKERKREP00000012482.1 | XP_033110777.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Anneissia japonica] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Hydra viridissima | g16819.t1.1 | none | – | JBrowse | |
| Leptogorgia sarmentosa | ENSAPQP00000022709.1 | CAB3983226.1 | Hypothetical predicted protein [Paramuricea clavata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Myxobolus honghuensis | EVM0014637.1 | CAH0367940.1 | unnamed protein product [Pelagomonas calceolata] | Q55AB6 DNA-directed RNA polymerases I, II, and III subunit rpabc5 O | JBrowse |
| Mastigias papua | BRAKERKYLP00000021997.1 | PFX25841.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Stylophora pistillata] | Q9VC49 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
| Morbakka virulenta | scaffold154.g34.t1 | NP_001137382.1 | RNA polymerase II subunit 10 [Nasonia vitripennis] | Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 O | JBrowse |
