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This orthogroup contains 213 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 213 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12371 | TRANSLOCATION ASSOCIATED MEMBRANE PROTEIN | 186 / 213 | 87.3% | 100.0% of 186 | ≥80% support |
| Pfam | PF03798 | TRAM_LAG1_CLN8 — TLC domain | 178 / 213 | 83.6% | 99.4% of 179 | ≥80% support |
| GO | GO:0006616 Biological Process | SRP-dependent cotranslational protein targeting to membrane, translocation | 186 / 213 | 87.3% | 100.0% of 186 | ≥80% support |
| GO | GO:0030176 Cellular Component | obsolete integral component of endoplasmic reticulum membrane | 186 / 213 | 87.3% | 100.0% of 186 | ≥80% support |
| GO | GO:0045048 Biological Process | protein insertion into ER membrane | 186 / 213 | 87.3% | 100.0% of 186 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 179 / 213 | 84.0% | 96.2% of 186 | ≥80% support |
| KEGG | K14010 | TRAM1 — Protein processing in endoplasmic reticulum | 158 / 213 | 74.2% | 98.1% of 161 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0055.g110.t1 | XP_044181090.1 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Aurelia aurita | scaffold147.g19.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold162.g6.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000042249.1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora awi | aawi_s0058.g103.t1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5R7Z3 Translocating chain-associated membrane protein 1 OS=Pongo a | JBrowse |
| Acropora cervicornis | KAK2548460.1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Aurelia coerulea | evm.model.ptg000024l.301 | XP_047145017.1 | translocating chain-associated membrane protein 1-like 1 [Hydra vulgaris] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora cytherea | acyt_s0097.g98.t1 | XP_044181090.1 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora digitifera | chr10Alt.g21011.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0083.g104.t1 | XP_015776226.1 | PREDICTED: translocating chain-associated membrane protein 1-like, partial [Acropora digitifera] | – | JBrowse |
| Actinia equina | EGACTEQ4350018436-PA | XP_031555240.1 | translocating chain-associated membrane protein 1-like [Actinia tenebrosa] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora florida | aflo_s0066.g93.t1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5R7Z3 Translocating chain-associated membrane protein 1 OS=Pongo a | JBrowse |
| Acropora gemmifera | agem_s0024.g111.t1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora hemprichii | Ahemp_008997-T1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora hemprichii | Ahemp_025962-T2 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5R7Z3 Translocating chain-associated membrane protein 1 OS=Pongo a | JBrowse |
| Acropora hyacinthus | ahya_s0029.g102.t1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora hyacinthus | ahya_s0029.g102.t2 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g17610 | XP_020896197.1 | translocating chain-associated membrane protein 1 [Exaiptasia diaphana] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Acropora intermedia | aint_s0083.g9.t1 | XP_029198929.2 | translocating chain-associated membrane protein 1-like [Acropora millepora] | Q5XI41 Translocating chain-associated membrane protein 1 OS=Rattus | JBrowse |
| Actinoscyphia liui | gene24332.t1 | XP_020896197.1 | translocating chain-associated membrane protein 1 [Exaiptasia diaphana] | Q9GKZ4 Translocating chain-associated membrane protein 1 OS=Bos tau | JBrowse |
