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This orthogroup contains 209 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 209 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10202 | PRESENILIN | 184 / 209 | 88.0% | 99.5% of 185 | ≥80% support |
| Pfam | PF01080 | Presenilin | 183 / 209 | 87.6% | 99.5% of 184 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 186 / 209 | 89.0% | 100.0% of 186 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 185 / 209 | 88.5% | 99.5% of 186 | ≥80% support |
| GO | GO:0016485 Biological Process | protein processing | 185 / 209 | 88.5% | 99.5% of 186 | ≥80% support |
| GO | GO:0042500 Molecular Function | aspartic endopeptidase activity, intramembrane cleaving | 185 / 209 | 88.5% | 99.5% of 186 | ≥80% support |
| GO | GO:0004175 Molecular Function | endopeptidase activity | 184 / 209 | 88.0% | 98.9% of 186 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 184 / 209 | 88.0% | 98.9% of 186 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0058.g67.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Alatina alata | Aala_g875.t1 | KAJ7394208.1 | Patched domain-containing protein 3 [Desmophyllum pertusum] | M0R3Q7 Patched domain-containing protein 3 OS=Rattus norvegicus OX= | JBrowse |
| Aurelia aurita | scaffold13.g23.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold13.g24.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold101.g50.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold6605.g1.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000010993.1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Acropora awi | aawi_s0016.g67.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | O12977 Presenilin-2 OS=Xenopus laevis OX=8355 GN=psen2 PE=2 SV=1 | JBrowse |
| Acropora cervicornis | KAK2567324.1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Acropora cytherea | acyt_s0004.g48.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Acropora digitifera | chr14Alt.g30957.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0001.g404.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Actinia equina | EGACTEQ4350020722-PA | XP_031567953.1 | presenilin-1-like [Actinia tenebrosa] | O12976 Presenilin-1 OS=Xenopus laevis OX=8355 GN=psen1 PE=2 SV=1 | JBrowse |
| Actinia equina | EGACTEQ4350020722-PB | XP_031567953.1 | presenilin-1-like [Actinia tenebrosa] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Actinia equina | EGACTEQ4350020722-PC | XP_031567953.1 | presenilin-1-like [Actinia tenebrosa] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Acropora florida | aflo_s0126.g40.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q90ZE4 Presenilin-2 OS=Danio rerio OX=7955 GN=psen2 PE=2 SV=2 | JBrowse |
| Acropora gemmifera | agem_s0032.g56.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | O12977 Presenilin-2 OS=Xenopus laevis OX=8355 GN=psen2 PE=2 SV=1 | JBrowse |
| Acropora gemmifera | agem_s1439.g1.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | O02194 Presenilin homolog OS=Drosophila melanogaster OX=7227 GN=Psn | JBrowse |
| Acropora hemprichii | Ahemp_010857-T1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
| Acropora hyacinthus | ahya_s0087.g49.t1 | XP_029179983.2 | presenilin-1-like [Acropora millepora] | Q4JIM4 Presenilin-1 OS=Gallus gallus OX=9031 GN=PSEN1 PE=1 SV=1 | JBrowse |
