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This orthogroup contains 202 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 202 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46202 | DNA EXCISION REPAIR PROTEIN ERCC-8 | 176 / 202 | 87.1% | 100.0% of 176 | ≥80% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 174 / 202 | 86.1% | 98.9% of 176 | ≥80% support |
| GO | GO:0000109 Cellular Component | nucleotide-excision repair complex | 176 / 202 | 87.1% | 100.0% of 176 | ≥80% support |
| GO | GO:0000209 Biological Process | protein polyubiquitination | 176 / 202 | 87.1% | 100.0% of 176 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 176 / 202 | 87.1% | 100.0% of 176 | ≥80% support |
| GO | GO:0006283 Biological Process | transcription-coupled nucleotide-excision repair | 176 / 202 | 87.1% | 100.0% of 176 | ≥80% support |
| GO | GO:0031464 Cellular Component | Cul4A-RING E3 ubiquitin ligase complex | 176 / 202 | 87.1% | 100.0% of 176 | ≥80% support |
| GO | GO:0043161 Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | 176 / 202 | 87.1% | 100.0% of 176 | ≥80% support |
| KEGG | K10570 | ERCC8, CKN1, CSA — DNA repair and recombination proteins | 153 / 202 | 75.7% | 99.4% of 154 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0099.g65.t1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Alatina alata | Aala_g2107.t1 | MCP3853013.1 | hypothetical protein [Gammaproteobacteria bacterium] | P20825 Retrovirus-related Pol polyprotein from transposon 297 OS=Dr | JBrowse |
| Aurelia aurita | scaffold1220.g1.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold1220.g1.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold153.g8.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold153.g8.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000007835.1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora austera | ENSKKQP00000007870.1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora awi | aawi_s0093.g65.t1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora cervicornis | KAK2570848.1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Aurelia coerulea | evm.model.ptg000031l.522 | XP_010625234.1 | DNA excision repair protein ERCC-8 isoform X2 [Fukomys damarensis] | Q8CFD5 DNA excision repair protein ERCC-8 OS=Mus musculus OX=10090 | JBrowse |
| Acropora cytherea | acyt_s0032.g10.t1 | XP_029214459.2 | DNA excision repair protein ERCC-8-like [Acropora millepora] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora digitifera | chr12Alt.g25089.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0107.g68.t1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Actinia equina | EGACTEQ4350043005-PA | XP_031549421.1 | DNA excision repair protein ERCC-8-like [Actinia tenebrosa] | Q8CFD5 DNA excision repair protein ERCC-8 OS=Mus musculus OX=10090 | JBrowse |
| Acropora florida | aflo_s0165.g39.t1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora gemmifera | agem_s0020.g158.t1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora hemprichii | Ahemp_001937-T1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Acropora hyacinthus | ahya_s0112.g67.t1 | XP_015756928.1 | PREDICTED: DNA excision repair protein ERCC-8-like [Acropora digitifera] | Q5BIM8 DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g4449 | XP_031549421.1 | DNA excision repair protein ERCC-8-like [Actinia tenebrosa] | Q8CFD5 DNA excision repair protein ERCC-8 OS=Mus musculus OX=10090 | JBrowse |
