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This orthogroup contains 198 genes from 135 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 198 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12111 | SPLICING FACTOR YJU2 | 170 / 198 | 85.9% | 100.0% of 170 | ≥80% support |
| Pfam | PF04502 | Saf4_Yju2 — Saf4/Yju2 protein | 176 / 198 | 88.9% | 100.0% of 176 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 176 / 198 | 88.9% | 100.0% of 176 | ≥80% support |
| GO | GO:0008380 Biological Process | RNA splicing | 170 / 198 | 85.9% | 96.6% of 176 | ≥80% support |
| GO | GO:0071006 Cellular Component | U2-type catalytic step 1 spliceosome | 170 / 198 | 85.9% | 96.6% of 176 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0134.g44.t1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Aurelia aurita | scaffold76.g70.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold76.g70.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold288.g3.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold288.g3.t3 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000034597.1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | Q9D6J3 Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 S | JBrowse |
| Acropora austera | ENSKKQP00000034608.1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | Q9D6J3 Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 S | JBrowse |
| Acropora awi | aawi_s0048.g34.t1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora cervicornis | KAK2563875.1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora cytherea | acyt_s0147.g42.t1 | XP_029194395.2 | splicing factor YJU2-like [Acropora millepora] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora digitifera | chr3Alt.g7277.t1 | none | – | JBrowse | |
| Actinia equina | EGACTEQ4350047910-PA | XP_031552245.1 | splicing factor YJU2-like [Actinia tenebrosa] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora florida | aflo_s0089.g34.t1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora gemmifera | agem_s0012.g90.t1 | XP_029194395.2 | splicing factor YJU2-like [Acropora millepora] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora hemprichii | Ahemp_000362-T1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora hyacinthus | ahya_s0155.g33.t1 | XP_029194395.2 | splicing factor YJU2-like [Acropora millepora] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29320 | XP_028516517.1 | splicing factor YJU2 [Exaiptasia diaphana] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Actinoscyphia liui | gene28126.t1 | XP_028516517.1 | splicing factor YJU2 [Exaiptasia diaphana] | A8WHR3 Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV= | JBrowse |
| Acropora loripes | alor_g14575.t1 | XP_015760709.1 | PREDICTED: coiled-coil domain-containing protein 94-like [Acropora digitifera] | Q9D6J3 Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 S | JBrowse |
| Actinia mediterranea | ENSQPTP00000020851.1 | none | – | JBrowse |
