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This orthogroup contains 192 genes from 127 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 192 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR31077 | U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN | 158 / 192 | 82.3% | 100.0% of 158 | ≥80% support |
| Pfam | PF08648 | SNRNP27 — U4/U6.U5 small nuclear ribonucleoproteins | 167 / 192 | 87.0% | 100.0% of 167 | ≥80% support |
| GO | GO:0008380 Biological Process | RNA splicing | 167 / 192 | 87.0% | 100.0% of 167 | ≥80% support |
| GO | GO:0071011 Cellular Component | precatalytic spliceosome | 158 / 192 | 82.3% | 94.6% of 167 | ≥80% support |
| KEGG | K12846 | SNRNP27 — Spliceosome | 129 / 192 | 67.2% | 100.0% of 129 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0006.g107.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Aurelia aurita | scaffold8.g160.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000037101.1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora awi | aawi_s0164.g14.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Aurelia coerulea | evm.model.ptg000002l.3 | VDN06746.1 | unnamed protein product [Thelazia callipaeda] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora cytherea | acyt_s0003.g160.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora digitifera | chr3Alt.g5388.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0009.g186.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Actinia equina | EGACTEQ4350011029-PA | XP_031555493.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Actinia tenebrosa] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Actinia equina | EGACTEQ4350052471-PA | XP_031555493.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Actinia tenebrosa] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora florida | aflo_s0044.g79.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora gemmifera | agem_s0228.g14.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora hemprichii | Ahemp_000980-T1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora hemprichii | Ahemp_023953-T1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora hyacinthus | ahya_s0089.g14.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g26631 | KXJ25353.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Exaiptasia diaphana] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora intermedia | aint_s0067.g35.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Actinoscyphia liui | gene18635.t1 | XP_031555493.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Actinia tenebrosa] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Acropora loripes | alor_g5305.t1 | XP_044182249.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
| Actinia mediterranea | ENSQPTP00000002686.1 | XP_031555493.1 | U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Actinia tenebrosa] | Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=M | JBrowse |
