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This orthogroup contains 191 genes from 132 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 191 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47227 | DNA-DIRECTED RNA POLYMERASE SUBUNIT K | 171 / 191 | 89.5% | 100.0% of 171 | ≥80% support |
| Pfam | PF01192 | RNA_pol_Rpb6 — RNA polymerase Rpb6 | 166 / 191 | 86.9% | 100.0% of 166 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 172 / 191 | 90.1% | 100.0% of 172 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 172 / 191 | 90.1% | 100.0% of 172 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 172 / 191 | 90.1% | 100.0% of 172 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 171 / 191 | 89.5% | 99.4% of 172 | ≥80% support |
| GO | GO:0001055 Molecular Function | RNA polymerase II activity | 171 / 191 | 89.5% | 99.4% of 172 | ≥80% support |
| GO | GO:0001056 Molecular Function | RNA polymerase III activity | 171 / 191 | 89.5% | 99.4% of 172 | ≥80% support |
| GO | GO:0006360 Biological Process | transcription by RNA polymerase I | 171 / 191 | 89.5% | 99.4% of 172 | ≥80% support |
| GO | GO:0006366 Biological Process | transcription by RNA polymerase II | 171 / 191 | 89.5% | 99.4% of 172 | ≥80% support |
| GO | GO:0042797 Biological Process | tRNA transcription by RNA polymerase III | 171 / 191 | 89.5% | 99.4% of 172 | ≥80% support |
| GO | GO:0005665 Cellular Component | RNA polymerase II, core complex | 170 / 191 | 89.0% | 98.8% of 172 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 170 / 191 | 89.0% | 98.8% of 172 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 170 / 191 | 89.0% | 98.8% of 172 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 154 / 191 | 80.6% | 89.5% of 172 | ≥80% support |
| KEGG | K03014 | RPABC2, RPB6, POLR2F — DNA repair and recombination proteins | 149 / 191 | 78.0% | 100.0% of 149 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0053.g30.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Aurelia aurita | scaffold22.g157.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000008197.1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora austera | ENSKKQP00000008203.1 | XP_029189478.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC2-like isoform X2 [Acropora millepora] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora awi | aawi_s0006.g114.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora cervicornis | KAK2569951.1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora cytherea | acyt_s0001.g122.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora digitifera | chr7Alt.g14729.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0070.g11.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Actinia equina | EGACTEQ4350038576-PA | XP_031561671.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Actinia tenebrosa] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora florida | aflo_s0001.g12.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora gemmifera | agem_s0091.g54.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora hyacinthus | ahya_s0035.g117.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21263 | XP_031561671.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Actinia tenebrosa] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora intermedia | aint_s0116.g8.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora loripes | alor_g12030.t1 | XP_029189478.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC2-like isoform X2 [Acropora millepora] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora loripes | alor_g2736.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora microphthalma | amic_s0010.g116.t1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora millepora | XP_029189478.1 | XP_029189478.1 | DNA-directed RNA polymerases I, II, and III subunit RPABC2-like isoform X2 [Acropora millepora] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
| Acropora millepora | XP_029189479.1 | XP_015779311.1 | PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like [Acropora digitifera] | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 O | JBrowse |
