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Support counts the member genes carrying the term. % of genes is that count over all 190 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47640 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED | 154 / 190 | 81.1% | 99.4% of 155 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 154 / 190 | 81.1% | 100.0% of 154 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 155 / 190 | 81.6% | 100.0% of 155 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 154 / 190 | 81.1% | 99.4% of 155 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 154 / 190 | 81.1% | 99.4% of 155 | ≥80% support |
| KEGG | K25079 | RBM42 — Domain-containing proteins not elsewhere classified | 150 / 190 | 79.0% | 100.0% of 150 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0018.g145.t1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Aurelia aurita | scaffold317.g17.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold916.g5.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000034858.1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora austera | ENSKKQP00000034865.1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q0P5L0 RNA-binding protein 42 OS=Bos taurus OX=9913 GN=RBM42 PE=2 S | JBrowse |
| Acropora austera | ENSKKQP00000034870.1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora awi | aawi_s0009.g23.t1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora cervicornis | KAK2573885.1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora cytherea | acyt_s0057.g97.t1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora digitifera | chr1Alt.g2184.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0002.g276.t1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Actinia equina | EGACTEQ4350035974-PA | XP_031561198.1 | RNA-binding protein 42-like [Actinia tenebrosa] | A2VDB3 RNA-binding protein 42 OS=Xenopus laevis OX=8355 GN=rbm42 PE | JBrowse |
| Actinia equina | EGACTEQ4350052768-PA | XP_031561198.1 | RNA-binding protein 42-like [Actinia tenebrosa] | Q66KL9 RNA-binding protein 42 OS=Xenopus tropicalis OX=8364 GN=rbm4 | JBrowse |
| Acropora florida | aflo_s0025.g20.t1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora gemmifera | agem_s0015.g21.t1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora hemprichii | Ahemp_011302-T1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora hyacinthus | ahya_s0001.g853.t1 | XP_044180266.1 | RNA-binding protein 42-like [Acropora millepora] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g10147 | XP_020899271.1 | RNA-binding protein 42 [Exaiptasia diaphana] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Acropora intermedia | aint_s0120.g24.t1 | XP_015760013.1 | PREDICTED: RNA-binding protein 42-like [Acropora digitifera] | Q6DRG1 RNA-binding protein 42 OS=Danio rerio OX=7955 GN=rbm42 PE=2 | JBrowse |
| Actinoscyphia liui | gene15864.t1 | XP_020899271.1 | RNA-binding protein 42 [Exaiptasia diaphana] | A2VDB3 RNA-binding protein 42 OS=Xenopus laevis OX=8355 GN=rbm42 PE | JBrowse |
